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GT17348

CSHL Arabidopsis genetrap mutant lines

Original: GT17348

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17348

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 566108 [Map]; Strand: c
      • AT4G01360.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unkno...
        Distance: 0; Region: exon2 (CDS)
      • AT4G01370.1 - [+] show detail - MAP kinase 4
        Distance: -987; Region: promoter
    Flanking Genome Sequence: GT17348 - 5-prime edge 
    CTATATTAAC ACTTTTAACC ATCGTTGGCA ATGTCACTCC TAGCTCTTCA 
    TCTCACTCGA CCAACAGGCT CTCCAACAAT GAGTCTCGGG CAGAGATCAC 
    CATCTTCGAC AAGCAACGTG TTTCCTTGGA GACTAGCTCA AACCTTTCCG 
    AAAGTTCTAT CACTGACTTC TCCAATGGTT CCACTAACAA AATAGGAACC 
    GACCCTTCTT GTACCGCTGT GTAAAGCTTC TTCACACCGG TTTCAACAGC 
    CTCGAGATCT TTTATAACCG TGAATCCGTC TGATAAAAAT GTGTTTTTGA 
    TCTCCGGGTT AATAGTGTTC TGCAGTTCCA TGAAAGCTTG AACCCATGGA 
    AGCTCCTCCA TCTCCTTTGG AATGGTTAGA TAGAAGAGAT TCTTGGAAGA 
    ACCCGAGAAC GATGCATCAA ACACGCTGAA TATGTATAAA GTCTTGACCT 
    TTACACCGTA TAAAACTCGT AAGAGAACTT TTCCTTCCGC AGAGTATTTC 
    TTCTCTTCAC TCGA

AT4G01360.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 99 Blast hits to 99 proteins in 25 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01370.1

Model type
Protein coding
Short Description
MAP kinase 4
Curator Summary
Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization.
Computational Description
MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink).
Link
InterPro Scan - TAIR