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GT17354

CSHL Arabidopsis genetrap mutant lines

Original: GT17354

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17354

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29190778 [Map]; Strand: w
      • AT1G77670.1 - [+] show detail - Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17354 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAACCA 
    TGACCACAGT TTCGACTCAG AACGAGTCTA CTCAAAAACC CGTCCAGGTA 
    AACTTCTCTG TTTCTTAGTG ATCTTTACTT TGATGGTAAA TAGTCAAATG 
    ATGATGAACA AAGGCATTGT TTCGATTCTC GTGTTACTGT TCTTGAAAGA 
    TCTAATCTTG AAGGGTCCTC CTATTTGTTT GGGCACTGCT TTTCCAACAT 
    TGGAAGCTGC TGTTCTGTCT ATTTGATGTT TTGTTTTTTA CCTCTGTTCG 
    TAATGATTTC CAACTTTGTC CGATTTGGAT TCCACTTAAG TTCTTGCTGT 
    TTGGTCCCAC TGTACCTTTT AACAGTTTAC ACTATCGAAT CAATCCCAGT 
    TTCATCTTCG TTAGCTCGAT GACCCAATTA ATGGGTTTTG CTTAAGCATC 
    GCAGAGTTTA AACCCGATAA A

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29190868 [Map]; Strand: w
      • AT1G77670.1 - [+] show detail - Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17354 - 5-prime edge 
    ACGATGGATT TTGGCGGAGC TTTGTCAGAA ATTAGAAGAG AATGGGAGAA 
    GAGAGGCTTT GAAGCTAAAC TGTTTGATCA TCACACCATT TATGTCCAGG 
    TACATTGACT CTGCATTACC ACAAGAAAAA TTCGGTAAGC TTTTTAGGGT 
    TTTTGATTCG TTCGAAATTT AGGAATTTTT GCCTTTTGTC GCAACAAGTT 
    GCAACTTTTG ACGTCAAGTG GGCTTTTACA ACACAACTCA TGATGCTTCA 
    TGGGCCATAC CATGCCGCCC TGAAGTTGAC GATGCAAAGT TTTAGTTTTG 
    TTGTTAAACC TTTTCTTTAT CAATTTTCGA ATAATATAAG CAAAACATAC 
    GGCAAAAAGT AAAATAAAAA AATACGAATT TCTAATTTAT CAGCCAAGAA 
    AATC

AT1G77670.1

Model type
Protein coding
Short Description
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Computational Description
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.3); Has 49407 Blast hits to 49405 proteins in 3078 species: Archae - 1141; Bacteria - 34862; Metazoa - 771; Fungi - 871; Plants - 1354; Viruses - 0; Other Eukaryotes - 10408 (source: NCBI BLink).
Link
InterPro Scan - TAIR