1. Home
  2. Mutant Lines
  3. GT17369

GT17369

CSHL Arabidopsis genetrap mutant lines

Original: GT17369

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17369

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3128790 [Map]; Strand: c
      • AT3G10116.1 - [+] show detail - COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
        Distance: 2171; Region: intergenic
      • AT3G10120.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -1282; Region: intergenic
    Flanking Genome Sequence: GT17369 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGGCAAGC 
    CTCCGCTACA ATCCTTTTCT TTTTGGTCAA CAAATAGATT TTTTTCGTAA 
    ACTTAATACT ATTTTTAGAT CGTGAATGGT TTGTAACAGT TGAAACTAGT 
    GTGGTTAGAT GTCTACTAAA GTATAAAGAT GGTTGGTGTA ATGCAATTAC 
    ACACAAAATG TTAATTCGTC TAACAAATCC AATAAAATAT TAATTCAATT 
    TTAACTATAT GCTTGTTAGT TAAAATGATA GATATAATTG CTTGAATCTT 
    GTCCAAAAAA AAAGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3128732 [Map]; Strand: c
      • AT3G10116.1 - [+] show detail - COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
        Distance: 2113; Region: intergenic
      • AT3G10120.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -1340; Region: intergenic
    Flanking Genome Sequence: GT17369 - 5-prime edge 
    ATTTCCATCC TACTTTCTAA GCCTACATCA TAAGGTGGAG CCACTAGGAG 
    GACCACAAAA GGAGTCCAAA TGACTTTTGA TAAGTGGATG TCACCTCCAA 
    TTCGAACCAC AACTTGATTT CTATAATCAT TCTTACATTG AATATTTCCC 
    CTTTCTCTTT AATCGCTAAC ATGCGCCCGC AAGTCTCACT TTCCTATACC 
    ATTGTTTTGT TAGTTGGAAC TCCACAAAAC CCAATTTCAT TGTACTTC

AT3G10116.1

Model type
Protein coding
Short Description
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Computational Description
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); Has 64 Blast hits to 64 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10120.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR