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GT17384

CSHL Arabidopsis genetrap mutant lines

Original: GT17384

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17384

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 281750 [Map]; Strand: c
      • AT2G01630.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: 0; Region: intron1 (CDS)
      • AT2G01630.2 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT17384 - 5-prime edge
    CTTTCTCCCT GCTTGTGGAA TCTTCTTTCT ACTTTTAGTG GTTGAAGTTT 
    GTCTCTTTCT TTGTGTGTTC TTTCTACAGA GGATCTATTT CTACTAATTA
    GAAACTGTGT TGTTTCATTT GCTTCCTTCA TTTTGTAAAT CTTTTGTTAA
    CAACTCCATA ACCATAGATG AGTTCTCTTT GTTTCCTATT AATGCAAAAA
    CAATTTGATA GATGTGTTCT TTCTGTGTAT TCCCTTCCCC CCTCGGACCA
    AANNCCTTTC CCCCAGAAAA GATGAAGACT TTAATTGAAA AATCTGTTTT
    TTTTAATAAA TATTCCAATG TTCCCATTCT TTTTAATGGG GAATGAGAAT
    CTCAAGATAT TGCATCCCAG CTCAGTAGTA GTACTCAGCA ATCTAACTGG
    ACCAAACTGT CCTCGGAGCT GGTTGAATAC CATACACTTC ATTCTAAGGG
    CATTTTCGAC TTTTGCGCAC TAAGCCAATG GCTTCTCTTT TTGTGTTTCC
    ACATACTTAG ATTTTAGATT AGTCCTATTG ACTCTTTGCA TTTGCATTTG
    GTTTTAATGC TTATTGAGAA TTGGACCGAC CAGTTGACGG ATTTTCATGT
    GAATTGTTTC GTTTTAAAAA TATGTTATTT CAGATTCTTT GATCGGTGTG
    AATATTGGTA CTGAAGTAAC AAACATGCCA AGTCCAACAC AAGTAGTAGC
    ACTCCTCAAA TCACAGAATA TCAACCGCGT CCGCCTCTAT GACGCAGACC
    GCTCAATGCT TCT

AT2G01630.1

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2926 Blast hits to 2856 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 93; Plants - 2819; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01630.2

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR