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GT17390

CSHL Arabidopsis genetrap mutant lines

Original: GT17390

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17390

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11184902 [Map]; Strand: c
      • AT5G29550.1 - [+] show detail - transposable element gene
        Distance: -388; Region: promoter
    Flanking Genome Sequence: GT17390 - 3-prime edge 
    AGAGGTTTTT ACCGACCGGT ACCGACCGTT TTCATCCCTA CCGGGAAGTC 
    CTCGTGTTGC ATCCCTCTCT TATGTTTAAC CTTTTTTGTT TTGGTTAAAA 
    CTTTATGACT CCATAACTTT TAGACCGTGA GGCCAAACTT GGCATGTGAT 
    ACCTTTTCGG AAAGCCCAAA GACAGCCCTC CGACGAAAGA AGCAGGACAA 
    TGGAACTATT CCATTGACTT TTTGTCGACC CCAAATTTTG ACCTTTAAGT 
    ACTTTTTCGG GCATTTTCGT GATTTGGGCT ATATTACGGA CCCAAAATTA 
    CTTGTTCAAG CATTGTTTTC GAATTTTTTC ATGCATCAAA GCTCGTTAAG 
    ACTAGATGGG GTATCCCTAC ATAGCGGGTG GGACCCACGG CGAATGGTTC 
    ATCAAGTCTT CAAAAAAAAA TATATACGAT TGCAATGCAT ATACTACCCG 
    ACCGGATCGT ATCGGAATTC ATCTCCCT

AT5G29550.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 7.4e-126 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR