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GT17405

CSHL Arabidopsis genetrap mutant lines

Original: GT17405

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17405

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8357460 [Map]; Strand: c
      • AT4G14550.1 - [+] show detail - indole-3-acetic acid inducible 14
        Distance: -7441; Region: intergenic
      • AT4G14560.1 - [+] show detail - indole-3-acetic acid inducible
        Distance: -3598; Region: intergenic
    Flanking Genome Sequence: GT17405 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATGAAA ACGATGTTCA 
    TGAGACTTCT CATGCTGAGG ATAAACTAGG CACGCTGCAT GCATGTTTTC 
    GGCATTAGTT CTCGTGTAAA AAATATTATT AGGATGATTT ATGTAGTTTT 
    GGTTGAATCC TCTTGGTGAA AATTCTTTTG ACCTAACGAA GTATTTTATT 
    CGTCATACCT ATGCAATATT CGCAGTAGAT AACAACCATT TGATATTCTT 
    CATAAGTTAA TCCACCTTAT CCTTCAACGT TTTCATTTTT GTGTGAATCA 
    TTATCCTAAC TATGTGTCAT CTATCGTAAT ATTGAGTGAT TGTTGATATA 
    TGATGCTAAA TTCTCGGCCA GACGCTCAAC GTTATCATCT TGTTCACCAA 
    ATCGCTACTG GTATTATCTA AATTCTTATC ATGAATTTTT CTTCAGGAGT 
    GAAACCTCTT TGAACCTATT GTTTGGACAT GCTAAAATGC AGTCTTTGAG 
    TTATTCTTAG GGTTCACATA ATGACTTAAC ACTTTCTTGG TAGAATTTAT 
    AGATCATGTA TGTTCCACAT AAANGGTTGT CTTTGATAAG GTGAGAGATC 
    TGGCGAAGAA TATTTCGCCC ATAAGAGTTG GCGGTGATGC GGTATAAACT 
    CAACCTGAAC CGAGTATATA AAAAGTGGTT TAAAGATGGC ACACGTGCAT 
    TTCTTAAGTT ATGGTATGTG TAGATAAATG ATTTGAATTG TGACTTAAAT 
    CTTTGTGGCT CAGCTTTTTG TCCTTTCTAC GATTTGATTT TGGACATACT 
    TTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8357391 [Map]; Strand: c
      • AT4G14550.1 - [+] show detail - indole-3-acetic acid inducible 14
        Distance: -7372; Region: intergenic
      • AT4G14560.1 - [+] show detail - indole-3-acetic acid inducible
        Distance: -3667; Region: intergenic
    Flanking Genome Sequence: GT17405 - 5-prime edge 
    CCACTTTCTC GGTGGTTTTC TCCTAGATTT GCGCATACTT ATAATATTTT 
    TGGCTAGGGT AACAACTTAA GTATCCATAT ATATTTGGGT AGTCAATAGT 
    CATGGTCTAA GACTTTTTTT CTTTTTAAGT CCAAAGAGTA ATATTGGCAC 
    CCGAAAAAAC TATGTTAGAA TTCGAACCCT GATGGTCAAT TATACTCGAA 
    CCCAGGTGAC GGAGAATTTT CTCTCCTTTA CCATTGTACC AAAGCAACAC 
    TATTTATTAT TAGGTGTTAG CTTAGAAGCA ATAGTTGCTG AAATTTGTTC 
    AAACGATAGA TGAGTCTATC TCAAGCTAGA TTAGAGGTGG AAACTAAATT 
    ATAAGAGCTT CCTTGCCATG GTTATGTCTT TCTCCATCTA GGGATGTGTC 
    TCAAGGGCAA GTTAATTAAG AGACAATTTA ATTTTGACGA CGTTCACAAA 
    AAAATGATGT GGGTTCATCT AAGGAAATTA AGCCTCATCC TCATTCATCT 
    CGGGCGACGA TGGTATGGCT TAAAGTTTCT ATACCTAATC ATTCTACTCC 
    ATGTGGTTG

AT4G14550.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 14
Curator Summary
IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.
Computational Description
indole-3-acetic acid inducible 14 (IAA14); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G14560.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible
Curator Summary
auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein.
Computational Description
indole-3-acetic acid inducible (IAA1); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 2 (TAIR:AT3G23030.1); Has 1898 Blast hits to 1895 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1895; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR