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GT17418

CSHL Arabidopsis genetrap mutant lines

Original: GT17418

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17418

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1246460 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 401; Region: intergenic
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 268; Region: intergenic
    Flanking Genome Sequence: GT17418 - 5-prime edge
    CTTTCTCCCT GATCCAGGAA TTGCGTAATG CATCTGTTCC GTTTCGCCAG 
    ATATAGGGTT TGCGTCAGCA TCAAATGTTG ATTCTTAGTA AAAAAAATAT
    TGAATTTTTG GTTTTCTTTC CAACATGTTA TTGTGGTTGT GGAAAGTTTT
    CTGAAGCCCA GAAAGTGTTT GATAGCATGC CTAGGAGGAG AAACGTAGAT
    TCGTTGAACC TTATGATTTC GATGAAGAGT TTATAGGATG GTTGGTTAAC
    ACATGCAAAT TGAAGCATTG TTTCTTCATA TGTATGTATC CCAATGTAGG
    AGCCTAGCTT TTCCAAGAAA AAAGTATCGG AACATGATTC GTTTTCGAAC
    ATATCCAAAT AGGATGATAT CGCAAGAAAG AGAGAAAAAG GAAAATCTCA
    GTATATAGAC AAAGTATACA TCCTTCGCTA TACACAACTA TTCTAATTTG
    TGATGTAACT ATACTTTACA CTACC

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link
InterPro Scan - TAIR