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GT17436

CSHL Arabidopsis genetrap mutant lines

Original: GT17436

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17436

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 121957 [Map]; Strand: w
      • AT4G00270.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: -3380; Region: intergenic
      • AT4G00280.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane...
        Distance: 452; Region: intergenic
    Flanking Genome Sequence: GT17436 - 5-prime edge 
    GATTTCCTCC TACTTTCATC CTGGTTCACT ACTCATGCAT GCTAATGTAG 
    ATGAAGCTTG TGGACGCTAA GAAATGTGAG TTGTTGTTGG AGAAGATGGA 
    TGTTTTGAAG GAGGTGACTT CGGTGCTTGC TCAAACCAAC TAAGAAGAAG 
    AAGAGGAAGC TATTGGATTG TATTATAGGT TTATCGGTTT TTAATCTCGG 
    GTTTCAATGG AGATGTAATG CCTTCTTTTG TTATCTAACT TAGGATTCAT 
    CCTTCACTCG ACCAGNGNAT GAACTTTTAG GACTTTGGAT TCTCGTGTGA 
    GAATTAGCTA AGTTGTCTTT GGTCGATGGT TGTAATGAAT TAGCTAAGTT 
    GTCTAACAAG CCTTTTGGTC GATGGTTGTA ATGAACTTTT AGGACTTTGT 
    AAAGGTGCTT CCTTTATGAA TGTCTCTCTA CTCAAAACTC ATAACCAGAG 
    TTATTACAAA ACAAAGAAAC ACACAATAGA ATGGATTCGC AAACATATTC 
    AGCAATGACA AGAGTTCTAA ATAGCTTATA TGGTGATAGG TTCAAGCTCA 
    TTAACAAAAC GGGTTATGAT CAAATACTCG AAGCCTTTTC ACTGCGGACA 
    TATTGTAACA GTTTCTGTTG CCTTGAGGGA AGCTCCTAAC GTTTTGAAAC 
    T

AT4G00270.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT2G25650.1); Has 282 Blast hits to 277 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 255; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00280.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase protein (TAIR:AT2G19210.1); Has 19 Blast hits to 19 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR