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GT17437

CSHL Arabidopsis genetrap mutant lines

Original: GT17437

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17437

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1245448 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT17437 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACTT ACCGTTTTCA TCCCTAGTGA 
    TAGCCCATGC AACGATGGAA GAAGCTCCAG CAGCGGCTAA ACTATCATTC 
    CTCCAAAACC TAATATGATT TGCTCCGGCC AACTTCGACG CTACTCCTAC 
    CACAGCCGCC AATATCGAAA ACGTCAAGAA GAACGGTGTT GCTCCATTGC 
    CTCCAAAACC TATTCAAACA TTACTAATAT TCTTAGTAAT TCCACTAGAT 
    CAGCTACATG ACCATATAAA TAGCTAGAGA GAAAGAGAAA AATAAATTTA 
    CTTGGGTGGT TAGTTTGGCC GTTGATGTAT TTATTGAGAC ACCAACTTGC 
    AAAACCAAGC ACAATCAGGT ACATAACAAG ATTCAAGAAC AGCAATGGTG 
    CTGCTATGTT TCTTCCCACT GTCGTCGCCA TCAATTGCTT CTTTTACCTT 
    CTCCTAAAGA TCTAGTTTTA CTCTTTTGCT ACTCGAAACC TTTCTTCTCT 
    TTGCAACAAC ACGTAAACTA ACTTGCTCGG TGATGATCTA TATGGAAGGG 
    CTATGTGAGA CATAGTTATA TACACCGAGC TTATGTGTTC GTTGGCAAGG 
    AGCACGTGCC ATGCGAAGAG GACCTTTGTG TTTAGCTACT TACAGGTGGT 
    GGGACACGTG TCTTGACGTT GTTTTAAAGT GTTGGATATA GCCAGTGTTG 
    TCATTGAGCT CGAATCTCCA AACCGCTTTC TTTATATTAT CTCCTTATGT 
    TTTATCAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1245507 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT17437 - 5-prime edge 
    CTTTCTCCCT GGCTATCACA GCTCTTGCCA TGGGGTAATT ACTTTATTTA 
    TGATGTCCTA TTAAATCTCA TGAAGTGCTA ATTTTTGACG ACTATTTTTC 
    TTTAAAACTT GGTTTTGGAT ATTTTGTGAA CTTCTTTATA TAGATGCATG 
    GAAGTGTCAG TGTTTGGTAA ATGGTATAAT AAACTTAATT TTGATGAAAG 
    GTTGGCATGC AAACAAATAA ACATAGGAGG ATGGAGAGGA TGGAGACTGA 
    AGATGATTGA AGCCTTCATT ATCATTTTGA CGTTCACGCA GCTTCTCTAC 
    CTCATGTTGA TCCATGCCGG TTCACTCAGC AGCAAATATG GTCCTGGATA 
    CAGAGACCAA GACTATGCTA CAGGCCAAGC TCATGGTCAT GGTCATGTAC 
    CACACACTGT GGGAGAGCAC AAGGCTGGTG TTGGATCTAC CATGGCAGTC 
    TGATGAAAAT CTGTGTCTTT TAATTGTGTT TTGACGTTTG GTTAAGAAGT 
    ACTTATTATA GTTTATGTTT TTTCAAGTTA TGTAATAATG TAATTCCTAT 
    CCATCTGACA AACGAACGAA TCTTGTGTGT TCTTTTGTTA ATTAGTAAAT 
    GGA

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR