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GT17450

CSHL Arabidopsis genetrap mutant lines

Original: GT17450

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17450

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19559158 [Map]; Strand: w
      • AT2G47730.1 - [+] show detail - glutathione S-transferase phi 8
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT17450 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTTGGAGTCA 
    GTACCCAACA AGTAATGGAT GGCTGGGAGG TGGTGAAGAT CAGCAAGAGT
    GAAGGAATCA CCAGCCAAGA ACTCAGATTT GGCGAGCCTA GCCTCGTAGA
    CATCCAAGAC TTTCTGGAGC TTACCTTCGA GCTCTTGGAC AGCGGCAGGG
    TCAGTGGTCA TGCCGAACAT GCCTTTAAAG ACACGCTCGA AGGCAAGCTT
    AGAGGCGTTA GGGTCAAACT GTTGACCTTC AACTTGAAGC CATACGTTAG
    TGGTTGCCTT GACTTTCTTG CAGTCTTGGG AGATAAGCTT TTCACCTTTC
    TCACTGTATT CCTCTGCTAG GTACTGTGTG ATGGCTCTTG ACTCTGCAAA
    TATATTACCA ACAAAAACTT TCAGCAACAA AAATAATCAT CACAGTCTGT
    CATTTCAGAT AAATCGTTAT CCAATACAAA GTGACTAAGG CGTAATGATG
    TTTCTGTAAA TCTAAAAAAG TCAAATCATT GATCAAAGCA AAAATAAACT
    GACCGAAAAG CGTCAAATCA CCGTCCTCGA GAGCAGGAAT TTGACCGAAG
    GGCTGAAACA AAACAAAGAT CATTGTCAGA TAATTGGAAA AACCAAACAT
    AAAGTGTTTT CAGTTTTGTT TGTTCGTAAA GAGAGAGAGG GAGAA
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19559222 [Map]; Strand: w
      • AT2G47730.1 - [+] show detail - glutathione S-transferase phi 8
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT17450 - 5-prime edge
    CTTTCTCCCT GCTAGTCCAG GTGCTCTTTG ACTCTCGCCC TAAGGTTAGC 
    GAGTGGATTA AGAAGATCTC TGCCAGGCCT GCTTGGGCTA AGGTTATTGA
    CCTCCAGAAG CAGTAGTGAC CCTCTCTCTT TCTTCACTTC TTTTCTTTTC
    CTTTTGCCCA AATAAACGAG TCCAGTGATT TTCTTTTCTT GGCTTATGTA
    CTTGTGTTTT CAGTATTATT TATGTCATCA TCATCCTCCT CTTTTGTGTT
    ATTGTTGGGT TCATTCACAT TTGTGCAATT AAAAACCAGA GTTTAAACGC
    CAAATTTGCA AAACCGTTAC ATTTTACCAA TGAAGAGGTT AAATGTCACG
    AACCAATATT GACTAAAGGA CTCCAATAAT CCAATAACTG TTAAGCTGAG
    AATAACCTTA ATTATATGGC TTTGTTCAAG AGCCGGACTT TAAACTCAAT
    CGGTTTCAAC CGAAGATAAG TTGCTTGCTC TGCAATTGCA TGACGCCTTG
    GGAACCAAGA TAAGTGGTTA TGCCCTTAAG AAAACCAGAG CACCAATGAG
    CTGAGAGTTT GGGAGATCTC TTGCGATGAG GATCATGACT CAGTACATTC
    CTAAACTATT CTCGTATCCA CTGAGTTACT CGTACAAATC CATAAATGAC
    CATACAAAGT AGCCTCTCGT GTGAAAATAG TGATAACAAT TAAAAATGAA
    AAAATGCGCA TCCAGGGAAT CGAACCCTGG TCAGTACTGT GGGAGGGTAC
    TATGATACCA CTACACCAGA TGCGCTTTTT ATTATGCTGA CAAGTTTTTT
    ATTATTAACT CTAAACATTT GTCTGCCGGG GAAAGTTTCC TGATGATAGT
    A

AT2G47730.1

Model type
Protein coding
Short Description
glutathione S-transferase phi 8
Curator Summary
Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description
glutathione S-transferase phi 8 (GSTF8); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: in 8 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 15602 Blast hits to 15586 proteins in 1475 species: Archae - 0; Bacteria - 9018; Metazoa - 1960; Fungi - 883; Plants - 1109; Viruses - 0; Other Eukaryotes - 2632 (source: NCBI BLink).
Link
InterPro Scan - TAIR