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GT17457

CSHL Arabidopsis genetrap mutant lines

Original: GT17457

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17457

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 42718 [Map]; Strand: c
      • AT4G00120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17457 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTTGTAACGG 
    ATGGCTTCGT CGAGCATGGA AGCTGTGTCC ATCTTCGCAC CACCAGGCAC 
    GATCCTCTTG AGAATTCGGA TCTTCTCGCT GATCCTTTCC CGACGCCGAC 
    GAGCAACCAC CGTCTGAGGA TCGTCGCTTA TCCTTACGTT ACGGCGGTTC 
    GGCTTAGGGA CCGTGGCAGG GTCGATGTCT ACGGGCTGCA TGACGGCGAT 
    CATGTACTGC ATCTCCTTCA TCGCATCCAT GTATTCATCT CACTCGA

AT4G00120.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR