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GT17462

CSHL Arabidopsis genetrap mutant lines

Original: GT17462

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17462

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26694587 [Map]; Strand: c
      • AT1G70770.1 - [+] show detail - Protein of unknown function DUF2359, transmembrane
        Distance: -3310; Region: intergenic
      • AT1G70780.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 579; Region: intergenic
    Flanking Genome Sequence: GT17462 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTAACA ATTTACCATG 
    ATTACCTTGC CACGATCCAA TTCGAACTTA AAACAAAAAG AGAAATGTGA 
    CAGACACGTG GCATTTAGAA AATATCTCAT CATCGTTATC ATCGTATGAT 
    GTGCATGGTT GGTCAATGGT CATAGTTAGT GAGACAAACA CCGTGTTGTT 
    TTTATGACTT ATGGAAGTGT GTAGAAACCT CCGGCGTTGG ATAAGGAAAG 
    TGTGGTGTGC GAGACGTGTA GTAACTAGTA AATAAAATAG TGTGTCGTTT 
    TCATGATAAG GAAGAAGAGA AGTAAAGCAC GGCAACAACA CTTGTAGAGA 
    GGCAAGAGTA CAAGTTGGTA CGGAACTTGT GTAGTAGTTT TAGTTGTTTA 
    TCATCATTCA TTTGTACTTT CTTCTATTTT TCTCTCCCCC CCTCAACCAA 
    ANNTNGNTTA CCGTTTTTCT AATCAAAATC AAACTTTTAA CACTTTTAAT 
    TTTGGATTCT CGACAATGAC GTCTCCTCCA CAACTTGACA CCTTAAGACA 
    AGAACATTAA AAAAGTATAT ACCTTAACAT TATTCCTCTT CACGGATACA 
    AGTATACAAC TATCACTTTA ATCAGAGCTC TGTTATTGCG TAACAATAAT 
    TTCAAAACGT GTTTTACGAG ACGAATAATA CAGAATTGTA CTAGAGAAAG 
    TACACAATTT GCTGACAAAT TTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26694516 [Map]; Strand: c
      • AT1G70770.1 - [+] show detail - Protein of unknown function DUF2359, transmembrane
        Distance: -3239; Region: intergenic
      • AT1G70780.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 650; Region: intergenic
    Flanking Genome Sequence: GT17462 - 5-prime edge 
    CTTTCTCCCT GATTGTTAGG CCAACGCTCT CGGTTACATG TAATCATCCT 
    ATAGTATACG ATTTAACTCG AACAGAAACA AAAGAAGTAT CTGTTTTTCT 
    TCTTCTTCTG ATTGAATAGT ATATAACATA TACTGTACTT GTTTGTTAAA 
    ACATGTTATA AATTAGTATT TAGATATTCG GAAACTAGAA ATACTAGCTA 
    TGGCCAAAAG AAATAAGTTT ATAGTTAGAC TTACATTTAT TATGGGCTTT 
    AAGGCTTCAA TCCATTGACG TCAAAAGAAA AAATCCATTA GATGTTTGAT 
    GGGCCGAATG ACTAAAAACT ACCGGCCTCA ATTTGACCAA ACTATTTATT 
    TACACAATTA ATAAATGAAA TTACTTTGTG TAAAAAAAAA AAAAATGGTT 
    TTCCAAAAAA AACCCTTTCC ATTTTCCCCC CCAAAAGAAA CAATTTTTGG 
    GCAACCCCCT TCCATTTTTT TGAAAACTTT AAGTTAAAAA AAACTAATTT 
    CCTTCAAAGG AAAAAAAACC CTTTTCCCCT TTAGGTTCTT TTAATTTTTT 
    AAAAAATTTT TGGAAAAAAA AAAAAAATTG GTTTCCCCCG AAAAAACATT 
    CAAAAAAAAT TTGGAAAAAC TTTTTTAAAA AAAAAAAAAA AAGGGGTTTC 
    AAA

AT1G70770.1

Model type
Protein coding
Short Description
Protein of unknown function DUF2359, transmembrane
Computational Description
Protein of unknown function DUF2359, transmembrane; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endoplasmic reticulum, nucleus, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2); Has 190 Blast hits to 170 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 3; Plants - 111; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70780.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR