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GT17467

CSHL Arabidopsis genetrap mutant lines

Original: GT17467

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17467

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28678509 [Map]; Strand: c
      • AT1G76420.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: -4575; Region: intergenic
      • AT1G76430.1 - [+] show detail - phosphate transporter 1;9
        Distance: 426; Region: intergenic
    Flanking Genome Sequence: GT17467 - 3-prime edge
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAAGAG 
    TGGGTGATAG ACTAACATGC ATGGCTAAAA TTTTTGGTAT ATGTAAACTC
    AAAATCAATC TCCACATATG AAAACAATAT TATATGACCT TAATAATCAC
    ATCCACCTTT TTTTAGTCAC TTATTCCTCA CGAATCACAA AAAATCTCTT
    GTAAAGTACT CCCTAGTAAT TAAAATGGAA TCTGCAACTA ATGTAATGAT
    TTGGAAAGAG TTAATGTTTC TATAAAAGTC TCCCTACTTA TTGCAGTTTT
    TACTCAGCTT TATTGATTAA TTAAAATTAA ATTGACTAAA AAAGGTTTAA
    AATTTCAAGA CCCTAAGCCG TCGCTTATGT GGCTTATGCC ACGGGCCGGC
    CCTGCGTGTA TCTATTTTTC TTTCTTTCTA TATGGGCCCA AATGGGCTTA
    AGTGAAGAAT TCTTGCAAAG GTAAGGATCA TAGTGAAGAG TTCTTGCAAA
    TATATGCACG GAATCAAAAA TTTATGTAAA CATGAGACTG AGAGAAAACA
    AAAACAAAAA AGAAACTTTA GTATCAACAA TCAAAAACCC AAGGACCATT
    TAGAGTTAAT TAGAGAGTAA TAAATCAAAG CACGATTGCT TTTGTCGTGA
    TCTTGAAATT AGTATTGTCT CCGAAGTAAC TCATTCGCAG GAGACGACCC
    TGCTGACGTG GAAACAATCT CGTCTTCGTT CTCTTCTAAC GATCTTCCCA
    TAGTTTCACG CGTGAACAAA TACGTTACGA TCATTCCCGC G

AT1G76420.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curator Summary
Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.
Computational Description
CUP SHAPED COTYLEDON3 (CUC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3005; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G76430.1

Model type
Protein coding
Short Description
phosphate transporter 1;9
Curator Summary
Encodes Pht1;9, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).
Computational Description
phosphate transporter 1;9 (PHT1;9); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;8 (TAIR:AT1G20860.1); Has 32041 Blast hits to 31917 proteins in 2260 species: Archae - 700; Bacteria - 22282; Metazoa - 2246; Fungi - 4097; Plants - 1720; Viruses - 0; Other Eukaryotes - 996 (source: NCBI BLink).
Link
InterPro Scan - TAIR