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Mutant Lines
GT17478

GT17478

CSHL Arabidopsis genetrap mutant lines

Original: GT17478

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17478

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 24290672 [Map]; Strand: w
- AT5G60390.1 - [+] show detail - GTP binding Elongation factor Tu family protein
  Distance: 0; Region: exon3 (CDS)
- AT5G60390.2 - [+] show detail - GTP binding Elongation factor Tu family protein
  Distance: 0; Region: exon4 (3UTR)
- AT5G60390.3 - [+] show detail - GTP binding Elongation factor Tu family protein
  Distance: 0; Region: exon3 (CDS)

ACGGTAGAGG TTTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACTCAT 
CATTTGGCAC CCTTCTTCAC TGCAGCCTTG GTGACCTTGG CTCCAGTTGG 
GTCCTTCTTG TCCACGCTCT TAATAACACC AACAGCAACG GTCTGCCTCA 
TGTCCCTAAC AGCGAAACGT CCCAAAGGTG GGTACTCGGA GAAAGTCTCA 
ACAACCATGG GCTTGGTTGG GGTCATCTTA ACCATACCAG CGTCACCATT 
CTTCAAAAAC TTGGGCTCCT TCTCAATCTC CTTACCAGAA CGCCTGTCAA 
TCTTGGTCAA GATCTCAGAG AACTTGACTG CAATGTGAGA GGTGTGGCAA 
TCGAGAACTG GGGCGTAACC GTTACCAATC TGACCAGGGT GGTTCATGAT 
GATGACCTGG GAGGTGAAGT TGGCGGCACC CTTAGCTGGA TCATCCTTGG 
AGTTAGAGGC AACGTATCCT CTCTTAAGAT CCTTGACAGC AACATTCTTG 
ACATTGAATC CAACATTGTC ACCGGGAAGT GCCTCAAGAA GAGACTCGTG 
GTGCATCTCA ACAGACTTAA CCTCAGTGGT CAACCCTGTG GGAGCAAAGG 
TAACAACCAT ACCAGGCTTG ATCATACCAG TCTCAA

AT5G60390.1

Model type: Protein coding
Short Description: GTP binding Elongation factor Tu family protein
Computational Description: GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G60390.2

Model type: Protein coding
Short Description: GTP binding Elongation factor Tu family protein
Computational Description: GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, plasma membrane, vacuole, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 85058 Blast hits to 84971 proteins in 18874 species: Archae - 1011; Bacteria - 34355; Metazoa - 21962; Fungi - 13018; Plants - 1903; Viruses - 6; Other Eukaryotes - 12803 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G60390.3

Model type: Protein coding
Short Description: GTP binding Elongation factor Tu family protein
Computational Description: GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR