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GT17486

CSHL Arabidopsis genetrap mutant lines

Original: GT17486

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17486

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17558524 [Map]; Strand: c
      • AT1G47710.1 - [+] show detail - Serine protease inhibitor (SERPIN) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17486 - 3-prime edge
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACGG 
    TAGTGCTAAC GGTGGTCCTA AGCTCTCGGT GGCTAATGGC GCCTGGATCG
    ATAAGTCTCT CTCCTTTAAA CCTTCCTTTA AACAGCTCTT GGAAGATTCG
    TATAAAGCTG CTTCGAATCA AGCTGATTTT CAATCGAAGG TGAGTTTTCT
    GATTTGATTA CTTGGTTCTG TGATCTAGAC TTAGTTCTTC AGGTACAGAG
    GAACTTTGTG TGGATTGTAA TAGAATCACT CTTAGGCCAA AATGTGGAAT
    TTTTGTTTCT GAATTTTACA CTTGAGGATC TGTATATGAT CGTATTAGGG
    TGGCTTGTGA TTTGATTCTA CAGAAATCTT GCTCTCGAAT TCGTTTTATT
    GATTGCAATA TAATTACTAC ATTTTGATTC TGCTTCCTAG GGTGTTGTAA
    ATACTAACTT TGTGTGGATT TTAGTAGACA CAATCAAAGG CCAAAATGTG
    GATTTGTTGT TTTCATTATG TTACCCGACC GGATCGTATC

AT1G47710.1

Model type
Protein coding
Short Description
Serine protease inhibitor (SERPIN) family protein
Computational Description
Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink).
Link
InterPro Scan - TAIR