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GT17494

CSHL Arabidopsis genetrap mutant lines

Original: GT17494

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17494

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12356511 [Map]; Strand: c
      • AT2G28800.1 - [+] show detail - 63 kDa inner membrane family protein
        Distance: 0; Region: exon10 (3UTR)
      • AT2G28800.3 - [+] show detail - 63 kDa inner membrane family protein
        Distance: 0; Region: exon10 (3UTR)
      • AT2G28800.4 - [+] show detail - 63 kDa inner membrane family protein
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: GT17494 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAAAACAAT TTACTTTGAT 
    CAACTACTGC TTTTAACTTT AGAATGACCT TTTTGTGCCC TAATATTAGA 
    TAATTACCGG ACATGGTGTA TGCAAATATA TATCAAAAGA TCAAACTAAG 
    GAACAAGATT CAAATCTCTC TCTTTTCTCT TCCTTACTTG CAATTTCGTT 
    TGCTTTGGTT CTATACAGTG CGTTTCCGCT TCGATCTTTT GCTTCTTCGT 
    TGGCCAACCT CAGGAAGCGG CTTGCTTGTT GTGCTCGAAG CTAACGCTCC 
    TTCACGAGCC TCTTCTTCCT CATCATCAGA CCCTTCTTCT GATTCAGACT 
    GAGATTCTTC TACCAATTCA ACTGTATCTT TCGCAACCGC CTTGTT

AT2G28800.1

Model type
Protein coding
Short Description
63 kDa inner membrane family protein
Curator Summary
member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.
Computational Description
ALBINO 3 (ALB3); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into chloroplast thylakoid membrane, thylakoid membrane organization, regulation of cell aging; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: OxaA/YidC-like membrane insertion protein (TAIR:AT1G24490.1); Has 8837 Blast hits to 8795 proteins in 2578 species: Archae - 0; Bacteria - 5819; Metazoa - 151; Fungi - 71; Plants - 148; Viruses - 0; Other Eukaryotes - 2648 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G28800.3

Model type
Protein coding
Short Description
63 kDa inner membrane family protein
Curator Summary
member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.
Computational Description
ALBINO 3 (ALB3); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: OxaA/YidC-like membrane insertion protein (TAIR:AT1G24490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G28800.4

Model type
Protein coding
Short Description
63 kDa inner membrane family protein
Curator Summary
member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.
Computational Description
ALBINO 3 (ALB3); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: OxaA/YidC-like membrane insertion protein (TAIR:AT1G24490.1).
Link
InterPro Scan - TAIR