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GT17501

CSHL Arabidopsis genetrap mutant lines

Original: GT17501

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17501

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19573772 [Map]; Strand: w
      • AT2G47790.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -745; Region: promoter
    Flanking Genome Sequence: GT17501 - 5-prime edge 
    CGTTACGTCT CATATTATCA CTACTTTTTT GCAGCAACAC AGTTTTATTT 
    CACACAATAC AACAACACTT TATATTATAT ATGAGAGTGA TAGAATTTTA 
    TCATTCCATA TTTCCATGAT ATAAAGGGTT CCAATAATTG GTCCAATTTT 
    TCTAATAGAC TTTTCTTATT CTCATAGACT CTTCTTATTC ATCTCACTCG 
    A

AT2G47790.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 11741 Blast hits to 7668 proteins in 457 species: Archae - 10; Bacteria - 2663; Metazoa - 3454; Fungi - 3073; Plants - 916; Viruses - 0; Other Eukaryotes - 1625 (source: NCBI BLink).
Link
InterPro Scan - TAIR