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GT17514

CSHL Arabidopsis genetrap mutant lines

Original: GT17514

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17514

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23176189 [Map]; Strand: c
      • AT3G62660.1 - [+] show detail - galacturonosyltransferase-like 7
        Distance: 1427; Region: intergenic
      • AT3G62670.1 - [+] show detail - response regulator 20
        Distance: 367; Region: intergenic
    Flanking Genome Sequence: GT17514 - 5-prime edge
    CTTTTTTTAA AGGTTTTTTT ACAGTCGACG ATATTGTTAC AGAAACTAAA 
    CGATATTTTA TTTCTCTGTT TTCATTAAAA CTATATAGGC TATGTAACTA
    CAACAATAAA ATTTGCGATT TCATTTTAGT ATCCAAATTT TGTATATGTT
    AACTTCTGAG CATAATGAAA TTTCAAGTAC CTACCATGGA AATGTCAGTT
    TAGGATATTA TGGGCCTTGC GAGATATTAA TATTTTGAAG TTAAAAATAA
    ATAGTCTGAA ACAGTGGCAT ATGTGTTATT TGGAATTTAA CACAAATTTT
    CACGATTAAG CACTTATATT TTTTTTTGTG ATTCAAAAAA GATAAACGAA
    CCAACAAGGT TTTCTATGTC GAACCAGTTT ATTTGATTTT ATATAAGATT
    TCTTCTATAG TAGGCTTAAT ACAGTCGACC ATTTGCCCAA AATTATGATA
    TATGAAAAAG AGTGATAACG TTGAGGATTA AAAACCGATG AC

AT3G62660.1

Model type
Protein coding
Short Description
galacturonosyltransferase-like 7
Curator Summary
Encodes a protein with putative galacturonosyltransferase activity.
Computational Description
galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62670.1

Model type
Protein coding
Short Description
response regulator 20
Curator Summary
member of Response Regulator: B- Type
Computational Description
response regulator 20 (RR20); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.1); Has 42655 Blast hits to 42546 proteins in 2672 species: Archae - 190; Bacteria - 36376; Metazoa - 10; Fungi - 129; Plants - 2482; Viruses - 1; Other Eukaryotes - 3467 (source: NCBI BLink).
Link
InterPro Scan - TAIR