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GT17532

CSHL Arabidopsis genetrap mutant lines

Original: GT17532

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17532

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18452268 [Map]; Strand: c
      • AT4G39770.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: -975; Region: promoter
    Flanking Genome Sequence: GT17532 - 3-prime edge 
    GTAGAGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAGTTCGAAG 
    ACTCCCTCCT GCAGTAAGAT CAAATATCAG ATTCTCAACG GAATTTAACT 
    ACATGCTTTT TCACTCGATG GCTTAATTAA TCCCATTTTC ACTTCTTCTT 
    TGAATGTCCA TTTACCTGAA CCATTTTATC TGAAATTTGC CTCACATGTC 
    ATCTTCATGN ACTCGCCGGT GAATTTTATT CTNCTCACTC GACCAAANCN 
    CNNATGCTCA AATCTCATAG AAGCTTCTAC TGCTGATGTA GAAAACATCG 
    TTGCATATGC ATGCATCATG ATTTAATTAC GAGATTTAGA AGAATTTGAA 
    TAGGATTCTT AGTAACTTCT AGGAGAAGGA AACCTTATTA AAAAGGGAAA 
    CGGGGTTATG GGACTAAAAT AGTCTACAAT TATTTTTATG ACCACTACTT 
    TCAGATATAG TTCGGTTTAC ATTTGATTGA AGCTTATTTT TATTTTTTTT 
    GGGATAACGA AATTATCACC TTTTTGTTAA TTAATTGTGG AACCTAAATC 
    AATTGTTGAT TGAACAAACC ACACTTTCAT ATATATATAT ACATACTTTC 
    TTAATTTTTG TAAGCTTTCT GATTTCGCAA CCAGTTATCT CTT

AT4G39770.1

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G22190.1); Has 2411 Blast hits to 2406 proteins in 857 species: Archae - 41; Bacteria - 1356; Metazoa - 219; Fungi - 156; Plants - 489; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
Link
InterPro Scan - TAIR