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GT17534

CSHL Arabidopsis genetrap mutant lines

Original: GT17534

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17534

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 475067 [Map]; Strand: c
      • AT2G02010.1 - [+] show detail - glutamate decarboxylase 4
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT17534 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAGAACCTGG 
    TTTATACAAG CATTATCAAA TGTTTAGTCT ATAAAACAAT TCCATGTACC 
    AGAAATACTA TTGAAAGTTA TTTATGTTAT GGACTTATGG TAATGTACCT 
    TTGGAGAAGT TGAGTGTAAA GGTTGGTTGA TCAGCGCCAA GATAATTGAT 
    ATGGAAGATA AGTTCATCAG GCAAATCGGT TTTGGTTCTC CATACAACCC 
    GACCGGATCG TATCGGTATA TTCA

AT2G02010.1

Model type
Protein coding
Short Description
glutamate decarboxylase 4
Computational Description
glutamate decarboxylase 4 (GAD4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 3 (TAIR:AT2G02000.1); Has 2849 Blast hits to 2845 proteins in 876 species: Archae - 190; Bacteria - 1701; Metazoa - 147; Fungi - 354; Plants - 286; Viruses - 3; Other Eukaryotes - 168 (source: NCBI BLink).
Link
InterPro Scan - TAIR