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Mutant Lines
GT17559

GT17559

CSHL Arabidopsis genetrap mutant lines

Original: GT17559

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17559

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 21414387 [Map]; Strand: c
- AT3G57800.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -2666; Region: intergenic
- AT3G57810.2 - [+] show detail - Cysteine proteinases superfamily protein
  Distance: -1397; Region: intergenic

TTTTACCGAC CGTTACCGAC CGTTTTCAGC TCCACTTCAC CTCCCAAAAT 
AAGAAGTCTA AGTCCAGTGC TAAATTTGGT TAGCGTCGTA ATGATTATAA 
ATCGTCAATA ACATTGAACT GTCCAAGTGT ATATATATAT ATATACTTAA 
ATGATTACGA AAGAGACGTC TCTAAATTTT CTACGTTATA CGTTTACACG 
TATAGAATTC GTCGTACATT TAAATACACG TACATGTATA TACATATTTG 
GCACAATGAT CGATACTGAT ACAGTGTTGT GTAATAGTAA ATAGTAAATA 
CGTTATAGGT AATGAGTGAT GCAAGTCGAA ACACTTCTAT CGATCATTGC 
TCACATGTTA GTTTCGGTGG ATTCAACCGA TTTTCTTATA ATTCATTATA 
TATACACTCC ACTTAAAGAA AGAAATTCTA CTTTCAAATG CATTAATTGT 
GAGAGAGCAT TAATTTGCTC ATTTGCAAAG ATACTTTGTT ATATGTGTCT 
GATAAAAAAA AAAACAAATT GGTGTCAAAA

5 prime edge [+] show sequence

Chromosome: 3; Position: 21414318 [Map]; Strand: c
- AT3G57800.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -2597; Region: intergenic
- AT3G57810.2 - [+] show detail - Cysteine proteinases superfamily protein
  Distance: -1466; Region: intergenic

CCTACTTTCT CCCTGGTGAA GTGCATTCAT GATGTTTGAT ATGTTTCAAA 
ATATTATACG ACTAAATAAT CCAAACAATC TTTTGATGAA AATAAAAATG 
TTATAGTTGA CGATAGAAAC GAGCAATGCT TCATATAACG TGGAACAATT 
GCATTACATA GACAATTGCT TGTGGACATT CGTACTCTAC ATAAAATTAG 
TCGAAGTTAG CAAAATTCAC CTAAGATATT GAATCGTTTG TGATACATTG 
CTTCTTCCTT TTGGGGGTTT GATATTAAAT GCTTTTACAA CTATATTTCC 
ATTGACAATC TACCTTTATA ATGATTATTA GCTAAACCAA CTTACAAACA 
ACGTTTTGAC AACCATAATT GTTATGCACT TTTCAATAGT CTTAACTCTG 
CTTACGGATG TCGTTTGCTC AGCAATTTGG GAAATGGGAA TAACTCATAT 
AAAGAGATAT GTGTGTTGTT GTGTGGATCC CATGCATGTC AGGTTTGTAA 
CAGCTGTCGA ATAATGCAAG CTACATAGAA AAATAAAACA TTTTCATTAA 
AACACAAAAA GAAGAAGGTT AGAGAGAGCT ATTCATTTAT TCATCGAAAC 
ATTTTAATAT GGGAAGAAGG GAATTCCCAC ACCACTCCAC TACGAAGAGA 
GGCTTCTTGG GCCAGTGTCA CGTGATTAAC ACGCGGATCC AGACCCACTC 
ATATATAAAC GAATTATCTA TAATATTTTC TAAAC

AT3G57800.2

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 2084 Blast hits to 2078 proteins in 112 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 38; Plants - 2016; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G57810.2

Model type: Protein coding
Short Description: Cysteine proteinases superfamily protein
Computational Description: Cysteine proteinases superfamily protein; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT2G38025.1); Has 624 Blast hits to 624 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 265; Fungi - 54; Plants - 235; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
Link: InterPro Scan - TAIR