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GT17610

CSHL Arabidopsis genetrap mutant lines

Original: GT17610

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17610

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 286100 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT17610 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACAA 
    GAAAGAGCTA GTAACCAAAA CGGGAGGAAA AGAGAACTTG CCTCTTCAGA 
    AACAGAAGAA GAGAACCAAA AAGACGTAAC TCGCCTTTAA AGATCAATCA 
    CCTGTCGTGA CCAAACCAGT TAAACGAATA AACAAATCTT AGTTTCTTAG 
    AAAAACAAGG CAAATAAAAA CAAGTGTTAA TAGATTTTCT TTGTGAGTTC 
    GTTTTCTGTT TTACTCTACG GTACTTACTA TGTTGAGCAT ACCTCTGTTT 
    CCATGGAAAT TGCCGGGTTG CTTTGAGAAC CGCCGTCTGA TCTTGACACG 
    TGTCCCTTTT GTAGCCCAAC TGAGGACCAA TCATATGAAG CATTGACCCA 
    AACCAAAGTT TAAACTTATA AGACGTTTTT TTGTTGGGCC TAATCGTTTG 
    T

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 286209 [Map]; Strand: w
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT17610 - 5-prime edge 
    AAGTCCATGG TTTTTCGTGT CTCATACTTT TCTATAACTT AGAAATCTCT 
    TTTCCTCTGC AGTTGTCTCT TCTTGCCTTC TATTGCTGAT AAGGTGTTTT 
    GAAAGAAGAA AAAAGCCTCA AATGAGCAAT ATAAAGCTCG GGGTTGAAGT 
    GATAAGCGCA CAGGGTCTGT TACAGAGAGA TAAGCATAAC TCATGTAGCC 
    CTTTCGTGGA GCTCAAGTTC GACAACCAGA TATTCCGCGC AACGACCAAA 
    CACAACGACC CAAATCCTGT CTGGCACGAG TGTTTTTACT TCGTTGTCTC 
    TGACCCTTCC GTCTTTGTCA ACTCGCACGC TTGA

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR