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Mutant Lines
GT17612

GT17612

CSHL Arabidopsis genetrap mutant lines

Original: GT17612

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17612

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 1976003 [Map]; Strand: c
  - AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
    Distance: -249; Region: promoter
  - AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
    Distance: -249; Region: promoter
  - AT3G06450.1 - [+] show detail - HCO3- transporter family
    Distance: 0; Region: exon13 (3UTR)
  - AT3G06450.2 - [+] show detail - HCO3- transporter family
    Distance: 0; Region: exon13 (3UTR)
Flanking Genome Sequence: GT17612 - 3-prime edge
```
AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT AGCGAAACCC 
GTGNGATCCA GATCTGATAC CCGACCGGAT CGTATCGGTA TATTCATCTC 
ACTCGACCAG AGAGAGACTA CACTATACTG TTTACTAAAC AGACTTTTCT 
AAATTAGAAA GTCTCTGTTC TCCTCCTCCA CCACCCGTGG CGGATCGTGG 
ACTGAACGGA GCTCTTCCAG CGGACGATCG T
```
5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT17612 - 5-prime edge
```
AAAATTTGAA TGATTTTGAT CTC
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 1975945 [Map]; Strand: c
- AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
  Distance: -191; Region: promoter
- AT3G06440.2 - [+] show detail - Galactosyltransferase family protein
  Distance: -191; Region: promoter

CCTACTTTCT CCCTGGTCAT TATGAGATTT AAGAAATGAA AAGAAGATTA 
TCTCTCGGAG AATTTGTTTA TTTCAGGAAA ATTTGAAATG ATTTTGATCT 
CCAAGTACAA AAAAATGGAC AAAAAAAATT ATTAGAGTCC TAGTTAGTAG 
TCCAAGAGTA CAAAACAAAG CAATACAAAA AAGTTAAAAC GACATCGTTT 
TCATTGTAAA TAACTGACAT CGTTTCGTTG TTATATAAAA CAACGTCGTT 
TCCTATAGCA ACAAGATGCT CAGACTCTGC TTCAGCTGGC CTTCGTCGTC 
TCTGCCTGGG CTCTGAAACT GCATTTGGCT GATCTTGGAT CTTCATGAAT 
TATGTACTTG AAAGATCATC GAAATTCAAT ATAAAACGGG TAAAGCTTCT 
CAATTTTACA ATAAACACAA CTTTTCAGCT ATTGAAACAG TGACTAAGCT 
GTTTTTCTTT TGAGCTATAT TTCTTTGTTA GTGCTAAGTA ATAGTAAACA 
ACAATTTACT ATGATCTTGC TTCTGGGTCT CCTTATATCC ATTAAAGACT 
GATCCTTTCT GCACCAATTC AGTTTAATCT TTCTTCTTTT AGCTTAAATG 
TCTCTGGTTA GTTATGTCTG AAGTATACAA CACCGGTTCC AAAGTTCGTT 
GACCATTGTT TGAGTTCTTC TTTTATTAGG ATTGTGAGAA TAAGAATCGG 
ATTATGCTAA CTCTAATTCG TAATCTGCGT TTTACTTTA

AT3G06440.1

Model type: Protein coding
Short Description: Galactosyltransferase family protein
Computational Description: Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2377 Blast hits to 2343 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1703; Fungi - 5; Plants - 611; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G06440.2

Model type: Protein coding
Short Description: Galactosyltransferase family protein
Computational Description: Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2239 Blast hits to 2201 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 1648; Fungi - 5; Plants - 523; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G06450.1

Model type: Protein coding
Short Description: HCO3- transporter family
Computational Description: HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT3G62270.1); Has 2674 Blast hits to 1402 proteins in 195 species: Archae - 0; Bacteria - 4; Metazoa - 2029; Fungi - 304; Plants - 228; Viruses - 2; Other Eukaryotes - 107 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G06450.2

Model type: Protein coding
Short Description: HCO3- transporter family
Computational Description: HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT3G62270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR