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Mutant Lines
GT17628

GT17628

CSHL Arabidopsis genetrap mutant lines

Original: GT17628

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17628

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 114852 [Map]; Strand: c
  - AT4G00250.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
    Distance: -886; Region: promoter
  - AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
    Distance: -119; Region: promoter
Flanking Genome Sequence: GT17628 - 3-prime edge
```
CGTTACCGAC CGTTTTCATC CCTATTCTTG AGTATATCAA TGGTCTCTCA 
TAGTTTCAAC AACACCAATA AACTGTCATC TTCAAGTTGG AGTTTATTAC 
ACTCGTTCCT TCAAGAAACT GTACCGTCGA CTTTCAGATT TAGCCATTTA 
GGACTTCTCA AGATTTTGAA AATGGCGCAT CAACATTTCT TCAAGCCTCT 
TCTTCCTGGC TTCCACGCCT CCTTGGTACT CTCTTTCTCG CTCTTTCCCT 
TCATCTTCAC TCGA
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 3298919 [Map]; Strand: c
- AT3G10550.1 - [+] show detail - Myotubularin-like phosphatases II superfamily
  Distance: -397; Region: promoter
- AT3G10560.1 - [+] show detail - Cytochrome P450 superfamily protein
  Distance: -974; Region: promoter

ATCCTACTTT CTCCCTGCAC ACGGTCCATA CATAGCGGAA TGAACTGTGA 
TTTCACTGGA GCTGAAGATT TTCCGGGTCG GAGTTTCAAC GGGTCGGGTC 
GCGAATTGTG CTCCACGTTC GATTAACGCT TCGTGGGCGA GAGTTCTTCT 
ACCGTCCAAA ATTTAACTTT ATATAAGAAA AACATTTCGT ACATTATATC 
TAATACGAAA AACAGTATTT TGAATAATTT AACTTTAGTT AAATTTCTAA 
ATTAGCGTTA AGATAAAGAA TTATTATGGA AAAATATTTT GGTAAATATT 
TTGATTGACC TCAGATTATT TTGCCTTGAT TTTTTTTTTT TG

AT3G10550.1

Model type: Protein coding
Short Description: Myotubularin-like phosphatases II superfamily
Curator Summary: Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P.
Computational Description: Myotubularin-like phosphatases II superfamily; FUNCTIONS IN: phosphatidylinositol-3-phosphatase activity, phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Myotubularin phosphatase (InterPro:IPR017906), GRAM (InterPro:IPR004182), Myotubularin-related (InterPro:IPR010569); BEST Arabidopsis thaliana protein match is: Myotubularin-like phosphatases II superfamily (TAIR:AT5G04540.1); Has 1697 Blast hits to 1550 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 1273; Fungi - 128; Plants - 40; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G10560.1

Model type: Protein coding
Short Description: Cytochrome P450 superfamily protein
Curator Summary: member of CYP77A
Computational Description: UNFERTILIZED EMBRYO SAC 9 (UNE9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: double fertilization forming a zygote and endosperm, pollen tube development; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, embryo, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 77, subfamily A, polypeptide 9 (TAIR:AT5G04630.1); Has 33598 Blast hits to 33350 proteins in 1733 species: Archae - 49; Bacteria - 4240; Metazoa - 11965; Fungi - 6662; Plants - 9437; Viruses - 6; Other Eukaryotes - 1239 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00250.1

Model type: Protein coding
Short Description: DNA-binding storekeeper protein-related transcriptional regulator
Computational Description: DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00238.1); Has 626 Blast hits to 580 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 135; Fungi - 97; Plants - 294; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00260.1

Model type: Protein coding
Short Description: Transcriptional factor B3 family protein
Computational Description: maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR