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Mutant Lines
GT17637

GT17637

CSHL Arabidopsis genetrap mutant lines

Original: GT17637

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17637

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 2992634 [Map]; Strand: w
- AT3G09750.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: 0; Region: exon1 (5UTR)

AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCGCCAC 
CGCCAAATAT GTAACTAAAT TCCCTGATTT TATTTGTCTC CTGTGTGTCA 
ATGTCAACGC CGGAAAGATG AAGAAGACGA TTACGAAGAA GAAGCAGAAG 
CAGCTGTCGT CGACGCCGGA ATTGACTCAT AATCCGTCAA TTCCCTATGA 
TTTTCTAATG CACATCGTCG CATGCATCCC AAGATTGTAC TATGAGTCTC 
TCACTCGTCT CCAAGAGCTT TCGATCTCTC CTAGCTTCAC CAGAGCTTTA 
CAAGGTAAGG TCACAGTTGG GCCGCACAGA GAGTTGTCTC TATGTTTGCT 
TCGATATGGA AAATGGTCTA AACTGGTTCA CCCTCTGCCG GAAACCTGAT 
AAAACCATAA CCGGTAAGGA GAGTGGTTAT GCTTTGGCTA GAGTCCCAAT 
CCCGCATTCT CCTAATGTAC GATTTTCGAG TCTCGTGCGG TTGGCTCTGA 
TATCTACAAC AATGGGGTAA GCCAAGATAG GTTCAAGTTA AGAGCTTGCT 
CCTCGAGCGT CTCGATTCTG GATTGCCGGT CTCACACGTG GCGCGAAGCT 
GCAAGCTTTC CGGTGGAGCT CTATGATGCT TCTGCTGGCG TCCTTTATGG 
AAAGATTGAT GTAGCAGGAA ATTCCCCAGA TAGGAACTCC ATGACGAAAT 
CTGTCGAGGT GTTCAAGTTG GACATAAAAA CACAAGTTTG GGATCCTGAG 
CCTATCCATT GCAGAGAGAC AAAATATCAT TATATGGAAG CTA

5 prime edge [+] show sequence

Chromosome: 3; Position: 2992724 [Map]; Strand: w
- AT3G09750.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: -45; Region: promoter
- AT3G09760.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon8 (3UTR)

TAATTTTAAA ACTTGTTGGG CTCTATGGGC CGTAGCGAAT TTGCAAGACT 
TTATAAAAGC CCAATAGTTT AATATACTAA AAGATACAAA ACTTCTTCTT 
TTTGTTTTTC TTTAAGAAAA CAACAGATGA TATACATACA CTCACACTCA 
CACTCACATT CACACACAAA AGAGACCCCC AAAAATCGAG CCTTAATCTC 
GTCAACTACC ACTACTTAAC TCACATGACC AATCTGTTCT CACATCTCTA 
AATAGATGGA TCTCCATCGA GATCATAGAC CACTACTGGA ACATATGATT 
AGTATTGATG GACCTCTGGC TTTCAGTTTC TTGATCCAGA AATGTTCTGA 
TCTGTTGTCT CAACCAGTGG TTGATCCACT TGACTACTGC TTGGAAGTTC 
AGCTGTCCTA TTGCTTCTCC TTC

AT3G09750.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G51250.1); Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G09760.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G03180.2); Has 1083 Blast hits to 1078 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 334; Fungi - 71; Plants - 602; Viruses - 25; Other Eukaryotes - 49 (source: NCBI BLink).
Link: InterPro Scan - TAIR