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GT17654

CSHL Arabidopsis genetrap mutant lines

Original: GT17654

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17654

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9914711 [Map]; Strand: w
      • AT3G26900.2 - [+] show detail - shikimate kinase like 1
        Distance: -197; Region: promoter
      • AT3G26900.3 - [+] show detail - shikimate kinase like 1
        Distance: -197; Region: promoter
      • AT3G26900.1 - [+] show detail - shikimate kinase like 1
        Distance: -197; Region: promoter
    Flanking Genome Sequence: GT17654 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GGGACCGACC GTTTTCATCC CTAGTTTTAG 
    GCGATCACCT ACACCTATTT GAAAAGAAAC GGATGTAAAA CGAGAAAATC 
    AGGATGGATA AGCAATGGAC AGGTTTTCCC TCCCTCTTAA ATTTATTTAT 
    GCAGAATAAC AAAAATTAAG TCTATAAATT TATTTTAATT TTTTATTTGA 
    TATATATATA TTTTTAAAAT TTATTTCTTA ATAAAATTTC CACAAACATA 
    TGATAAAATA AATTAATACG TGGCGGATAT CTTGGGACTA GAGGAAGGAG 
    GGAGAGAAGG AGCTTAAGAG AGCATTCGTC GTCGTCAATG GAGATCTTCT 
    CTGCGTCTGC TTCTCTAACT TTAACTGGAT TCGTTCCTCG TCTTCTTCCC 
    TTGCTCTCTC CTCAAGCTCG AACTACTTCC TGCAAGCCGT TGCTGTCT

AT3G26900.1

Model type
Protein coding
Short Description
shikimate kinase like 1
Computational Description
shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 3815 Blast hits to 3815 proteins in 1373 species: Archae - 6; Bacteria - 2903; Metazoa - 33; Fungi - 1; Plants - 140; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G26900.2

Model type
Protein coding
Short Description
shikimate kinase like 1
Computational Description
shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G26900.3

Model type
Protein coding
Short Description
shikimate kinase like 1
Computational Description
shikimate kinase like 1 (SKL1); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR