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GT17662

CSHL Arabidopsis genetrap mutant lines

Original: GT17662

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17662

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 95234 [Map]; Strand: w
      • AT4G00230.1 - [+] show detail - xylem serine peptidase 1
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT17662 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGC 
    CGTCGTGCTT GAAGTACTTG GCGCCGATTA TTTTGCTGTT GAAGTTACAT 
    TAATTAAATA TTTATTATTT CAATCAGAAC CCTTATGTTA ACGCATAATT 
    CTAATTTGCT CCCTAAACTC TTAAATTGAT CAACTAACTC CTTATGTTAA 
    CGCATAATTC TAATTTGCTC CCTAAACTCT TAAATTCATC AACTAACTCC 
    TTATTTGTTT TTCTAGCAAT GACATTTTCT TTAACAATTG CTCAAGAGTT 
    CATGTNTGCT TAGAGATCAA GATNTCTCTA GTGATCAAAG TTTGTATTTA 
    AAATCGATTA AAGTAGAAAA TGGTAAGAGA TAAATTGTAT ACTTGTTGCA 
    TCCGGTGAAA TTTTTATAAG GTCCACAAGA TCCTTTCCAT TTAGCCGGAG 
    GAGGTCCTAG ACCATGGTCT AGGAAACTCT CTGAGTCTGG CGTTATTCCT 
    GATTGTTGTA TTATAGGAAG GTTTAGATAA ATTATAAGAA GCATAAATGA 
    ATAATATCGA ATCAATTTGC ATATAGAAAA AAATAAACCT GTATCAAGAA 
    CACCAATAAT AACATCTCTC TCTGCTTTTA GATGTCTTTT TGCTGTCAAA 
    GGAAGTCCAA CAAAATCCCA AGATTTTTGT CGTGTGAAGT TTGCGATATT 
    GATTTCGGGA TACACTAACA ACTTCTTCCA TCTCTGCACC AGTGCATGGG 
    ATGGGGAGTT ATATGAATCT CACTAGCTA

AT4G00230.1

Model type
Protein coding
Short Description
xylem serine peptidase 1
Computational Description
xylem serine peptidase 1 (XSP1); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G03620.1); Has 8915 Blast hits to 7721 proteins in 1255 species: Archae - 263; Bacteria - 5173; Metazoa - 170; Fungi - 606; Plants - 1952; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink).
Link
InterPro Scan - TAIR