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Mutant Lines
GT17673

GT17673

CSHL Arabidopsis genetrap mutant lines

Original: GT17673

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17673

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 303120 [Map]; Strand: c
- AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
  Distance: 0; Region: exon4 (CDS)
- AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
  Distance: 0; Region: exon4 (CDS)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCAGACACGA TCAAGCTCGT 
CTTTTAAACG AGCGTTTTCG ATACGGAGAT GATGTTCTTC AAGAGAGACA 
TCACCAAGCA TGGCAGGTCC ACCACAATTG GTGCAGATTG GATTCCTCAT 
TGCTTCACGA ATAGACATGT TCTCAGCTCT TAACTTATCG TTCTCTTGTC 
TCAATAACGC GTTCTCATGC CTCTCTAATT GAGTCTGCGC CACAATATGA 
TTTTATTACA AAAGAATTCA TTTTTTGGGA TTAAAGATGT GATTTAATCT 
CCACATACCT CTTTNNNNNT TGTGAAACAA AANNNTGGAA CCAGAACTTG 
ACTTGTCTTG TCTCTAAGCA AAGTCTCTTA CTTAGTTCTA ATCTTTGTTT 
CTCGTCTGGA TGCGGACACT CTTTGAACAT ACTGAAAGCA AAAACTCAGA 
TTCATTAGAT CGAATAAAAG AGATGATGGT AATAACAATA TGGATATTGG 
ATCGAAAGGT ATAATTACGA TTCGAGTTCT TGGATTTGTT GAGGAGTGTG 
TCGGTGATAA CGTTTCTTCC GAGGAGGCTT ATCAGCAGCG TCTTGATCTT 
CACCGGAGAT ACCTTCAACG TTATCACTAC CAGATCTACT CT

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 335272 [Map]; Strand: w
  - AT2G01770.1 - [+] show detail - vacuolar iron transporter 1
    Distance: 0; Region: intron3 (CDS)
Flanking Genome Sequence: GT17673 - 5-prime edge
```
TAATTTGTTG TTTTCTGTTT GTTACTATTC ACGTACTTTA TTTGTTGCAA 
CAAAAAAGAT TAAAATTGGA AGTCGGACCA TATAAGAATC TTGCCCACAC 
CTGGAAAGTA TAAGCTCAGC TTTTGCAGAA ATCTAAAAGT ATCCCTCGAT 
TTTCTCGTTT AATTAAGCAC TATATAATAT ACA
```

AT2G01770.1

Model type: Protein coding
Short Description: vacuolar iron transporter 1
Curator Summary: Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.
Computational Description: vacuolar iron transporter 1 (VIT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); Has 1947 Blast hits to 1945 proteins in 688 species: Archae - 106; Bacteria - 1196; Metazoa - 0; Fungi - 163; Plants - 191; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00730.1

Model type: Protein coding
Short Description: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary: Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description: ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 12660 Blast hits to 12608 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9962; Fungi - 223; Plants - 2228; Viruses - 1; Other Eukaryotes - 246 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00730.2

Model type: Protein coding
Short Description: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary: Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description: ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR