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GT17674

CSHL Arabidopsis genetrap mutant lines

Original: GT17674

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17674

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 249450 [Map]; Strand: c
      • AT1G01690.1 - [+] show detail - putative recombination initiation defects 3
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT17674 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTGGAC 
    ATTGTTTTTG ATCTATTACC AACTAATTTA TCGCTTCCCA GGAGAATCCA 
    TTAGGGTTTT GGCTACTGAT AATGTTTACT CTTTGGAATT AGAAGGAGAT 
    CAGCAGAACC ACAAGCATCT CAGCAGCTTC GATCTCAACA GTCACAGCAG 
    TCCTTCTCTC AGGGACCTTC TTCTCCTCAC TCGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 249381 [Map]; Strand: c
      • AT1G01690.1 - [+] show detail - putative recombination initiation defects 3
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT17674 - 5-prime edge 
    CTGATGTCCA CATACAGATC ACTGACACTC GTCTCCAGTC ACAAACCAGA 
    TTCGGAACAA AACAAAAACC CTAAACGATG GAAATCGCAG TGTAATCTCA 
    AATCAAATTG TGAAAGAGAG AGATACGGAG AGAAGCGAGA TGGCACCTTA 
    AATTAGGAGG AAAGACAGAA ATAGATTTCA GATCGCAGGC TTTGTTAATA 
    TTCATCTTCA TCTCACTCGA

AT1G01690.1

Model type
Protein coding
Short Description
putative recombination initiation defects 3
Curator Summary
Encodes a novel plant-specific protein that is involved in meiotic double strand break formation.
Computational Description
putative recombination initiation defects 3 (PRD3); Has 279 Blast hits to 273 proteins in 87 species: Archae - 2; Bacteria - 106; Metazoa - 105; Fungi - 5; Plants - 32; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Link
InterPro Scan - TAIR