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GT17675

CSHL Arabidopsis genetrap mutant lines

Original: GT17675

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17675

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7023758 [Map]; Strand: c
      • AT3G20120.2 - [+] show detail - cytochrome P450, family 705, subfamily A, polypeptide 21
        Distance: 0; Region: intron1 (5UTR)
      • AT3G20120.1 - [+] show detail - cytochrome P450, family 705, subfamily A, polypeptide 21
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT17675 - 3-prime edge
    GTTATTTTAT GGAATGTTAC TCTCCATGAA TTTCCCAATA GTAAACCACT 
    TGATAAAAGC TTGTTATCTT TCTT
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23038574 [Map]; Strand: w
      • AT3G62260.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: exon4 (CDS)
      • AT3G62260.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT17675 - 5-prime edge
    CTTTCTCCCT GGTTTCGCCA TCCAACAGAT TCCTCAAGCT ACAGAAAGCT 
    TCGGGCGAAA GACTAAAACA CCTTCTCTTC TCCAATGGCA CCACCGGCTT
    GTCCCCTCTG TCCATTGTCA TGAAACATAC CACCACCGCA GTTAAATTAT
    CAAATGAGTT CCGCCCCAGA GCCTCCATCA CCAGCTCTCG CGCACATCTT
    GTTGGATCGT TGTGCCGGTT TAAGCCACGC CTAACAATGC TAACCGCTTC
    TTGGCTCGTC AAGACATCCC AAATCCCATC GCACCCAATC ACAAGAAACT
    CATCGTCTTC AGTTAGAGTT ATCTGCTTGA TTTCTGGTTC CGAGATCAGT
    GGAGATTGAG AGCCGTGTGG CAGTTTTAAA TCCCAGTCGC CCAGAGCTCG
    GGTTACAGCT AGGACTTCAT TTAGGTAACC GTCATTAGTG ATGAAACCGC
    CGGATTCCTC CACT

AT3G20120.1

Model type
Protein coding
Short Description
cytochrome P450, family 705, subfamily A, polypeptide 21
Curator Summary
member of CYP705A
Computational Description
"cytochrome P450, family 705, subfamily A, polypeptide 21" (CYP705A21); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 20 (TAIR:AT3G20110.1); Has 32337 Blast hits to 32253 proteins in 1630 species: Archae - 50; Bacteria - 3458; Metazoa - 11535; Fungi - 7214; Plants - 8855; Viruses - 3; Other Eukaryotes - 1222 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G20120.2

Model type
Protein coding
Short Description
cytochrome P450, family 705, subfamily A, polypeptide 21
Curator Summary
member of CYP705A
Computational Description
"cytochrome P450, family 705, subfamily A, polypeptide 21" (CYP705A21); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 20 (TAIR:AT3G20110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62260.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7561 Blast hits to 7526 proteins in 871 species: Archae - 12; Bacteria - 1200; Metazoa - 1621; Fungi - 783; Plants - 2603; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62260.2

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7565 Blast hits to 7530 proteins in 876 species: Archae - 12; Bacteria - 1215; Metazoa - 1621; Fungi - 781; Plants - 2594; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink).
Link
InterPro Scan - TAIR