1. Home
  2. Mutant Lines
  3. GT17676

GT17676

CSHL Arabidopsis genetrap mutant lines

Original: GT17676

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17676

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3360440 [Map]; Strand: w
      • AT3G10730.1 - [+] show detail - SAD1/UNC-84 domain protein 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17676 - 3-prime edge 
    AGTCCTAGGA CAATAAGGCG GACGCCGGTT CTCTCCGGTG AGAAGAAATC 
    TAATTTTGAT TTCCCGCCGA GCGAATCTCA TGCCAATGCG GCAATTGGAG 
    AGTCGTCTGC TGGTACGAAC AAGGATCTGA TTCGCGCCGA GGCTGCCGGT 
    GAGAGATCCA ACACCTACTA CGTAGGTCCG GTGACAAGGA AATCAGGATC 
    CACCGCGACG GGGACTAATA CTACCACCAC GGAGCGTCGG ACGCGGCACT 
    CTCTGGGGAA TAAGATACAT AGAGGGAAAT GGAAGACAGT GGTTAGGGTA 
    TT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23038569 [Map]; Strand: w
      • AT3G62260.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: exon4 (CDS)
      • AT3G62260.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT17676 - 5-prime edge 
    CCTACTTTAT CCCTGGTTTC AGCCATCCAA CAGATTCCTC AAGCTACAGA 
    AAGCTTCGGG CGAAAGACTA AAACACCTTC TCTTCTCCAA TGGCACCACC 
    GGCTTGTCCC CTCTGTCCAT TGTCATGAAA CATACCACCA CCGCAGTTAA 
    ATTATCAAAT GAGTTCCGCC CCAGAGCCTC CATCACCAGC TCTCGCGCAC 
    ATCTTGTTGG ATCGTTGTGC CGGTTTAAGC CACGCCTAAC AATGCTAACC 
    GCTTCTTGGC TCGTCAAGAC ATCCCAAATC CCATCGCACC CAATCACAAG 
    AAACTCATCG TCTTCAGTTA GAGTTATCAT GCTTGATTTC TGGTTCCGAG 
    ATCAGTGGAG ATTGAGAGCC GTGTGGCAGT TTTAAATCCC AGTCGCCCAG 
    AGCTCGGGTT ACAGCTAGGA CTTCATTTAG GTAACCGTCA TTAGTGATGA 
    AACCGCCGGA TTCCTCCACT CTT

AT3G10730.1

Model type
Protein coding
Short Description
SAD1/UNC-84 domain protein 2
Curator Summary
Encodes a member of the Sad1/UNC-84 (SUN)-domain proteins: AtSUN1(At5g04990), AtSUN2(AT3G10730). SUN domain proteins are part of the cytoskeletal-nucleoskeletal bridging complexes. AtSUN1 and AtSUN2 are localized to the nuclear envelope and are present as homomers and heteromers in vivo.
Computational Description
SAD1/UNC-84 domain protein 2 (SUN2); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: nuclear envelope, endoplasmic reticulum, phragmoplast, spindle; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919); BEST Arabidopsis thaliana protein match is: SAD1/UNC-84 domain protein 1 (TAIR:AT5G04990.1); Has 537 Blast hits to 534 proteins in 132 species: Archae - 4; Bacteria - 39; Metazoa - 349; Fungi - 35; Plants - 67; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62260.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7561 Blast hits to 7526 proteins in 871 species: Archae - 12; Bacteria - 1200; Metazoa - 1621; Fungi - 783; Plants - 2603; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62260.2

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G48040.1); Has 7565 Blast hits to 7530 proteins in 876 species: Archae - 12; Bacteria - 1215; Metazoa - 1621; Fungi - 781; Plants - 2594; Viruses - 9; Other Eukaryotes - 1333 (source: NCBI BLink).
Link
InterPro Scan - TAIR