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GT17691

CSHL Arabidopsis genetrap mutant lines

Original: GT17691

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17691

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 110727 [Map]; Strand: w
      • AT4G00240.1 - [+] show detail - phospholipase D beta 2
        Distance: -9; Region: promoter
    Flanking Genome Sequence: GT17691 - 3-prime edge 
    CCTATCTGAA GACGATTGAA TTTCTTTATG AATTAGTCAG TTGTGGTGTT 
    AGTTAGTTAC GATGGAGAAT TATGGTTGGA ATTACCCTTA TTACCCTTAC 
    AGGCCTCCGC GGCCTAATCC TCCTTACCCA GCACCGCCTC ATCACCATGG 
    ATCAATGTCT CATTCGGGTC CATTAGACCA CCACCACCCT CCAATGAGTT 
    ACTATGCTTC TTTTGATTAC CAACACCAAC CTCCTCCTCC TTACCCTCCA 
    GTGAGTTACT ATGCTTCGTT TTCAAGTCAT TCAGATTTAT CATACTCAGG 
    CAGGCTAGAT TCGTCTGGTC ATGGTTTTAC ATCTACCGCA TCGCCGCATA 
    GTCCCGGTAT GCACATTGTG CCCTTTGGTA AAGCCTCCTT GAAGGTCCTC 
    TTGTTGCATG GTAATTTGGA TATTTGGGTT TCTTGTGCTA ATAATCTACC 
    AAACTTAGAT TTGTTTCATA AGACATTGGG TGTTGTGTTT GGTGGCATGA 
    CCAATATGAT CGAAGGCCAG TTGAGCAAGA AGATCACTAG TGATCCTTAC 
    G

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 110772 [Map]; Strand: w
      • AT4G00240.1 - [+] show detail - phospholipase D beta 2
        Distance: -54; Region: promoter
    Flanking Genome Sequence: GT17691 - 3-prime edge 
    AACGGTAGAG TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTATATA 
    GCACACTCTA GCACATATCT TTATGAATTA GTCAGTTGTG GTGTTAGTTA 
    GATACGATGG AGAATTATGG TTGGAATTAC CCTTATTACC CTTACAGGCC 
    TCCGCGGCCT AATCCTCCTT ACCCAGCACC GCCTCATCAC CATGGATCAA 
    TGTCTCATTC GGGTCCATTA GACCACCACC ACCCTCCAAT GAGTTACTAT 
    GCTTCTTTTG ATTACCAACA CCAACCTCCT CCTCCTTACC CTCCAGTGAG 
    TTACTATGCT TCGTTTTCAA GTCATTCAGA TTTATCATAC TCAGGCAGGC 
    TAGATTCGTC TGGTCATGGT TTTACATCTA CCGCATCGCC GCATAGTCCC 
    GGTATGCACA TTGTGCCCTT TGGTAAAGCC TCCTTGAAGG TCCTCTTGTT 
    GCATGGTAAT TTGGATATTT GGGTTTCTTG TGCTAATAAT CTACCAAACT 
    TAGATTTGTT TCATAAGACA TTGGGTGTTG TGTTTGGTGG CATGACCAAT 
    ATGATCGAAG GCCAGTTGAG CAAGAAGATC ACTAGTGATC CTTACGTG

AT4G00240.1

Model type
Protein coding
Short Description
phospholipase D beta 2
Curator Summary
member of C2-PLD subfamily
Computational Description
phospholipase D beta 2 (PLDBETA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D, plant (InterPro:IPR011402), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D/Transphosphatidylase (InterPro:IPR001736); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2407 Blast hits to 1935 proteins in 427 species: Archae - 0; Bacteria - 522; Metazoa - 526; Fungi - 534; Plants - 642; Viruses - 3; Other Eukaryotes - 180 (source: NCBI BLink).
Link
InterPro Scan - TAIR