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GT17788

CSHL Arabidopsis genetrap mutant lines

Original: GT17788

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17788

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 186957 [Map]; Strand: w
      • AT2G01422.2 - [+] show detail
        Distance: 2223; Region: intergenic
      • AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
        Distance: 841; Region: intergenic
    Flanking Genome Sequence: GT17788 - 5-prime edge 
    TGATGGTTTA ACAAACCAAT GAGCTAGAGG GGTATGTCTG ATGTCTTGAT 
    CAAGTCTGGT GTCTCGAAAT AAACACAAGC GAGTGTTGGG ACGCGGGCAA 
    ATTGATTTGG TACCGTACCG ACCGTTATTT AAATAAGAGG TACCAAACCA 
    CTGAACTAGT CGAAGGCCCA AGTTATGATG GGCCACTAAA TTTAACGGCT 
    ACAGTGTTTC GCGTTCATCT CACTCGACAA ACAACATTAA TGCAACTATA 
    ATTTGTCTTC AAAGAACACA AGTTTTCTTT TTTCCCCAAA AATCAACATA 
    TGTCATTTAG AATTTAATTA GTCAACAATT AGTTTATATA CAAT

AT2G01422.2

Model type
Other RNA
Link
InterPro Scan - TAIR

AT2G01430.1

Model type
Protein coding
Short Description
homeobox-leucine zipper protein 17
Computational Description
homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).
Link
InterPro Scan - TAIR