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GT17797

CSHL Arabidopsis genetrap mutant lines

Original: GT17797

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17797

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8162380 [Map]; Strand: c
      • AT1G23037.1 - [+] show detail - F-box associated ubiquitination effector family protein
        Distance: -34; Region: promoter
    Flanking Genome Sequence: GT17797 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAAGAGT ACGAATTTGT 
    AACCTCAACA CAAGACAGGT TGTGGAATTA CCCGTTATGA AAGGCAATAA
    TGATAACAAT GTGTTCTATG TTGGACACGA TCCTGTTCAT GATGAATACA
    AAGTGCTTAG CATGGTTTGG GAGGTGAGCA ATGAAGAAGA AAGAGTAGAG
    TGAGATCCGA GAATCAGGTG TTGATACTTG GAGCGCTGGA GCTTAATGGA
    AAAAGACACA GTGCCACATT CCTCATCGCC CTTTCCGTTC TTGCTCGCAA
    GGGGTGATCA CCATTAATGG TGCTTTGTAT TGTAGGGCTT GGAATGATGC
    AAATATATGC GTGTGTATGA GTTTTAACTT GAGTTCTGAA GAGTTTAGTT
    TGATTTAATT ACCCATGAAT GCTTGTTGGA AGGACTTCTC TTGCAGAAAT
    CTCATGAACT ACAACGGAAA TGTATCTATC TTTCAATCTT TGAATTTCTT
    TAGAGATCGT ATTGTGGATG TTTGGGTTCT TGAAGAGGGC GGCAGGAGTC
    AATGGTCGAA CAAAAAGGCT TTTGTCTTGC CTGATTTTCA GATGAACTTC
    CAGCATGGAG ATCGGTTATG GATGGGTGGC ACTAGTCGCA GTGGTGAGGT
    TTGGTTTTCA AAGGCAAGTC TCTTGCTGAA TCAACCTTCA CGCTTTTTCA
    TTTATGATTT AGAGAGGAAT GAGATGACTC AAAGGATTGT TACAGGGCCA
    TTAGTTGATG TCGTCTTTAG AAAATTTG
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8162309 [Map]; Strand: c
      • AT1G23037.1 - [+] show detail - F-box associated ubiquitination effector family protein
        Distance: -105; Region: promoter
    Flanking Genome Sequence: GT17797 - 5-prime edge
    CTTTCTCCCT GGTACTCTTC TCCATTTCTG TACAGAGCTC ACGAAGCGGC 
    CACCCTCTAT TGTCGGAATG GTCAGATCTT GGCCGATTAC AGAGACCGAT
    GTGTCCGAGT GATCATGATT CGAAGATGTG TGCAACGCAT ACTTGCTATG
    TTTTTCGCTC TCCACAAAAT AGGTGAGATA ACGACTTCGT GGTGAGGGTT
    TAAGGAATCA GTTGGTCATA TCTGATAAGA ATCTCGATCA ACAGTTCCTC
    CCGTAAGGCG GCGCTCATGA TCAGCTCCTC CTTCTCTTTC TTTTTCCTCA
    CGTATTTTTG TGTTTACAAA CCTAAATCAT ATCTTTCTCT TTTTTTTAAG
    AACAATATCA CCTAGGGGTG AACTTATTTT ACCCAATCAG AAGCCGCCAC
    CTAATCAAAA AACTAAATAC ATTTAATTAT AAAATCTAAA TCTTAAATTT
    CTTTTATAAC CAAAATCAAT ATATAATTGC TTGTAATTAC AAAATCTACA
    CCATAATCCT CTTTTGTAAA TCAAAACCAA AAATTAATTT TGTTTCATTA
    TAAAATCTAA ATTTAACCAT TATTTTTAAA TTCAAATTGA TATTTAATCT
    CGTTTAAATA TAAAATCTAT AACTGTTTAT AAAATAAATC ATTTTGGTGG
    AAGATATATT TTTCAATTAA ATAAATTTGC TTGTTTTTGG TGATATATGC
    TGATTGATTA AAGGGTGAAT AATAGGATTT ACTCATATAA GTGAACCAAA
    GTAACTAAAA AAAATGGTAT TGTATAGAAT AATTCGGCAA CGGGAAAAAA
    AATCCATGGT TATCCCCTTT TATCTCATTT TCTTA

AT1G23037.1

Model type
Protein coding
Short Description
F-box associated ubiquitination effector family protein
Computational Description
F-box associated ubiquitination effector family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 3 (InterPro:IPR013187); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G52320.1); Has 71 Blast hits to 69 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR