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GT17826

CSHL Arabidopsis genetrap mutant lines

Original: GT17826

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17826

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1972813 [Map]; Strand: c
      • AT3G06437.1 - [+] show detail - pseudogene, hypothetical protein
        Distance: -358; Region: promoter
      • AT3G06440.1 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: GT17826 - 3-prime edge 
    AGTTGAAGGT AGGTTTCTGT CCAAATAGAG CTCAATCAGC GCCAATGAGC 
    GATAAATCAA AATCTCTTGT TCTTGTGAAC CATTTCCCTG ATGCTGCGGA 
    TGTGATAGTA GCATGTAAGC AAAACTCAGC TTCTCTTCTT GAATCCATAA 
    AGACATGTTA CCAAGCCGCG GGACAGCGAT GGCCTAACTT CATCTCACTC 
    GACAAAAATT AGTCTAGGAG TTTGGTAATG AACAAGAATG TAATTTGATT 
    TACAATCACT GTTATGAAAT CTTTTGTCAT TGATGTACTT CACTCTTTTT 
    ATCGTCTGGT TGAATTGTTG AATCCATATC CCGATCGCGA CATCTTCCAG 
    CTTGAAGAGC TTTCAACAAA CAACATAAGA ACAACGTCAC TTATGATATC 
    TAGGATTCAT TATATCTTAA CTCTATGGCG ATGAAACTAC AAAACGCACT 
    CCAAGATCTC TTTGACGGGG ACCCTTCCCC ACAAATTTCG CTATATCATG 
    AGAGATGATG TAGCCAGGGC CATGTGACCA TGGAGGGAAT GAATCTAAAG

AT3G06437.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR

AT3G06440.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: galactosyltransferase1 (TAIR:AT1G26810.1); Has 2377 Blast hits to 2343 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1703; Fungi - 5; Plants - 611; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR