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GT17911

CSHL Arabidopsis genetrap mutant lines

Original: GT17911

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17911

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 138524 [Map]; Strand: c
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -718; Region: promoter
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -718; Region: promoter
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -721; Region: promoter
      • AT2G01270.1 - [+] show detail - quiescin-sulfhydryl oxidase 2
        Distance: -807; Region: promoter
    Flanking Genome Sequence: GT17911 - 3-prime edge
    TAAATATTGA GCACTTGCCT CTGCATTCTG CAATAGGCGG CTAGTTTTTA 
    TCAGCCACAT AAGTAGTCTT TTATTATTTG AAGATATGCA CATGACCAAC
    ACATTATAAT GTTCTTTTTG CCTGGCTTCG ATAGGTCCAC AAATAATGGG
    TTTGATAGAA AACAATTCTT GCATAATGTG GGGGATTAGC CTAGCTAGAC
    ATGAAGCATT TTTTTGGAGT ATATAAATGG GGATTTTAGC AATACTATGA
    TTAGTATTTG GATTATGTAA TCTGTGATAC TTAAACACAT TGCCTGCATA
    TAAATCCCTA TATTATTTAA AATATATCAT TTTTTATTTT TGACAGAAAT
    CATAGAGATT ACGGAAACAG ATAAAAGCAC GCTCCAGAAA ATTAGAGACA
    AATATTACTA TTCAAAAAGA TTCAGATCGC TACTAAGTGA GGGTCGCCAA
    ATCGCGAGTC GAAACACCGA TTGAGTCCGC GAAATTCGGA AATTTGCGTG
    GTTGCCACAA TACCGAAGTA CTGGAATCCT CATCGTGAAT GGAATCTCTA
    TATGTAATGT TTCAGTGTAG TAAATTTCAG GTCTTAGCAT TTGCTTTCTA
    GATTTGTATG TCTAAAATAA GTGTTAAGCT TGAATGTTTG ATAACAGTAT
    CGACCATAAA TCTCCCATCT AAGCCGATAA TGTGTTTTGA TCATCATTGT
    GAATT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 138390 [Map]; Strand: c
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -584; Region: promoter
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -584; Region: promoter
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -587; Region: promoter
      • AT2G01270.1 - [+] show detail - quiescin-sulfhydryl oxidase 2
        Distance: -941; Region: promoter
    Flanking Genome Sequence: GT17911 - 5-prime edge
    CATTCATCTC ACTCGACAGA AACTCCTTAT AATCTCATAT AAGTGTTACT 
    AAATACATGA ATATATATGT TCTGATACGT TTATGTCATT GTCAATGAAT
    GATGAATGTA GTTGGTGTAC ATGCATTAGT CGAATCTTCA ATGGTAGTAT
    AGTTTTTGAT TACTCTTGAA CATTGTGAAG CTTATCTATG AACAAAAAAA
    GAAAGACCAA ATGTTTTACA GCCTTTCTTT TTTATTTCTT TATAATCTTG
    TCAGCATCTA GCAAGCAAGC ATCGAGTATC AACCATTAAA TTAAAGAGCC
    TCCTAATATA CATATGGCCT TTGGCTTTTG CCAATGTTTA ACCCCTTTAT
    ATTTCCCATA GTCACATATT TCTCATCAGA TTTTAAAATG TTACATTCAT
    AACCCCAAAT CATTCCTATG CACCATCTAC ATTATGCATC TGAGCAGTCT
    AAAATACCTT GCATTACCGT ATGATTAACT TGTTTATAAG TAAGCGTATA
    ACTGAATTAC AAAGAAGTTT CGGGTAAAAC TGTAATCAAT CATCAAAATG
    AAAAGGACCA AAATGTAAAA ACACTAACTT ATGAGGGATT CATGTGTTAT
    TCAATGGTTT TTGTCTCTCC CCCTCCAATT ACTAACCAAT CGTCTTTCTC
    TCTTCATTGA CCCCTTTTTT TGAAATTACC AAATCT

AT2G01260.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01270.1

Model type
Protein coding
Short Description
quiescin-sulfhydryl oxidase 2
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.
Computational Description
quiescin-sulfhydryl oxidase 2 (QSOX2); FUNCTIONS IN: thiol oxidase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Erv1/Alr (InterPro:IPR006863), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: quiescin-sulfhydryl oxidase 1 (TAIR:AT1G15020.1); Has 2833 Blast hits to 2194 proteins in 312 species: Archae - 22; Bacteria - 32; Metazoa - 1533; Fungi - 396; Plants - 476; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR