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Mutant Lines
GT17919

GT17919

CSHL Arabidopsis genetrap mutant lines

Original: GT17919

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17919

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 13863 [Map]; Strand: w
  - AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
    Distance: -504; Region: promoter
  - AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: exon1 (CDS)
  - AT4G00040.1 - [+] show detail - Chalcone and stilbene synthase family protein
    Distance: -764; Region: promoter
Flanking Genome Sequence: GT17919 - 3-prime edge
```
GAGTATTTTA CCCACCCGGA CCGACCGGTT TTATCCCTAC CTCTCGACGA 
TGAACAACTG TTCCTTCTCC GACCTCCACC AGAGCCGCCT CTTAGCATAT 
AGAGAGTCGT CTGTGGTGAT GGAGCTGCGC CCGATAACCG TCATGGATTC 
GATGGCGTTC ACGATTTCAT CTCGCTTCTT GGGGTCTTTC TGGGTTCTCA 
GACCTCGATC CTCCTCGGAG ATCAGCTCAA GCAGCTTCCT CTTGGCTCGC 
TGTGCTGGAT TCGCGAAGAT CGAGCAGCTT GTTCGAAAAC CGGCACGACG 
AGTGCGG
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 299638 [Map]; Strand: c
- AT2G01670.1 - [+] show detail - nudix hydrolase homolog 17
  Distance: -1537; Region: intergenic
- AT2G01680.1 - [+] show detail - Ankyrin repeat family protein
  Distance: -6747; Region: intergenic

CCTACTTTCT CCCTGATCGG AGCATCTCGT AATCAAGCCT CATCCATTCC 
ATGATCTCGT CCAGTTCATC TCACTCGACC AAAATTCGAC CCATGAGGTT 
GGTATATAAT AGGGAGCAAA AATATGAATC TTCTTGGATT AAAAACCGGT 
CCAAACCACG CCTTATACAT TAGGAGTTTT ATATTGAATA AAACGATCGG 
ATTACTTGTA ATATATGCAA CGACTGCATC ACTCTCAGGT AAGAAAAAAA 
CGTAGATACA TCGAACATAC ATCAAACGCA GACGCGTTCA CTAACCGCGA 
TTCAAACACG CACTTGATCG ATCTAGGACA TAGGTTAGGA GGCGTCGACT 
CACGTGACCA TGTCTCTTCC AAAGTCAACA TAAATGTGCC GCGTAAGGAT 
AGAGACTACT TTTGTTGTTG TTTTACTACG TTTCTAATTT TATACTAAAT 
TTTACGTGTT TAATTATTAA CCTAATGGCT AAATGTCTCT AGTTATTAAC 
CAATTAAACC CTACAAATCG AGAGACCACG AAACGACAGA GAAACCCCTT 
AAACACTTTG ACAGAGACAA CGTCCAATTA TTAATTACGT TGAATTATTG 
GCCTTTATGC CTTAAATTGA TTCTCTTACT ACTTCTTAAT TTTGTTGACC 
TACCAATATA TATTTACAAA GTTGTATCAT CGGGCGTTTA ATGTTGAAAC 
CCATGCTACT ATTATTAATC TGCACTACCA CGTAAATTTT GCAGTAAGAG 
CTAATG

AT2G01670.1

Model type: Protein coding
Short Description: nudix hydrolase homolog 17
Computational Description: nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01680.1

Model type: Protein coding
Short Description: Ankyrin repeat family protein
Computational Description: Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 36872 Blast hits to 17947 proteins in 711 species: Archae - 48; Bacteria - 2509; Metazoa - 18623; Fungi - 3211; Plants - 2983; Viruses - 164; Other Eukaryotes - 9334 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00026.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00030.1

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00040.1

Model type: Protein coding
Short Description: Chalcone and stilbene synthase family protein
Computational Description: Chalcone and stilbene synthase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT1G02050.1); Has 5683 Blast hits to 5679 proteins in 1391 species: Archae - 0; Bacteria - 1882; Metazoa - 0; Fungi - 67; Plants - 3528; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).
Link: InterPro Scan - TAIR