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GT17936

CSHL Arabidopsis genetrap mutant lines

Original: GT17936

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17936

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 115629 [Map]; Strand: w
      • AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT17936 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TGCTTAAGAG 
    TCAAATACCA TCAAGTCATA ACGTAGACTC GAAGGCGCAA CATTAGCCAC 
    AAAACAAGAG GGATCTCGTG AAGAAGACTC TGCTTCTCCA TTTGGATTCT 
    CCTTCACTTT CTTTTTCTCT GAAAAATAAT AGAATCTAAG TGTTATATAG 
    TCAAACTGGT TATCTCTACT CACTGATCCA CATTCCAAAA GCAAACCACG 
    TTTCTTGAAG AGCCAGAGAC AGAACACAAC TCACCGTCAC CGAGGTTGTT 
    CATTTCGCTC GACCACGAAC CATATTGAAT CCCACAACAA CTAGGTCCCA 
    ACAGTGTTAC ATGGAAAGCC AAGTCACTCT CTTGTCTGAA AACAACAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 115909 [Map]; Strand: w
      • AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT17936 - 5-prime edge 
    GGGTGGGTGA GTTTTTGTGA TGCCAATGGG CTTAAAGCTG GCGATAACTA 
    CACTTTCAAA CTGATCAAAA GAGCAGGAAC TCTTGTTCTA CGTTTGTTAC 
    CCAATGAGCC AAAAGAGGAA GCTAATGAAG TGTCTCTTCC CGAAGAACCG 
    GAAAGCGATG CAGAGCGCAA CCTTGGTGAG TTCTGTTCTT TCTTTCTCTA 
    ACTCTGCCCA TGATACTTGA CATTCAAGAA ACGTGCTCAT ATGGATTTTA 
    TTTCTTTCTT TTTTTCAGAA AAGATTCAAA GGAAGGAGAA AGTGAAGAAG 
    AATGTAACAA GAGAGGGAGA GTCTTCTTCA CAAGATCCCT CTTGTTTTGT 
    GGGTAATGTC TCCCCTTCGA GTCTACGCTA TGACACACTG GTATTCTACT 
    CTTACTTTTG GAT

AT4G00260.1

Model type
Protein coding
Short Description
Transcriptional factor B3 family protein
Computational Description
maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR