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GT17948

CSHL Arabidopsis genetrap mutant lines

Original: GT17948

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17948

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5676079 [Map]; Strand: c
      • AT2G13610.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: -248; Region: promoter
    Flanking Genome Sequence: GT17948 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATGGAG AGTGAGAGAG 
    GTTCACATGC AGTTGTTCTT CTCACTTCTC TTTAACTTTC CCAAGACATG 
    AAGAGTCACG TGTTCCTTTG TGATATTATT TATATATTTA CTTTCATATT 
    TTGTAATATA CTTGTGATTT CTTCATCAAT TTATAATTTT TAAAAAATTC 
    AATTAATATT AATAAAAGTT ACCGACGGCT AATTCTCAAA ATCACTTTTT 
    TTTTCTTTTC GGCAAATCGA TTTACATGAA ATATAAAAAA CATTCAAAAA 
    CAACCTTTGA AACAAATAAA GAAAATTAAA CACAATTTCG ATAAAAAATA 
    AATAGAAGTA ATCTTGCTTT CTATACGGAA GTTTTATAGG CAATAGATAA 
    AATCTGTTAA ATCTCTTCTT TATATCCTCT TAAAAAACTA ACATCTTATA 
    GATAAAAGTT ACAAAATATT TTTCTCATCA CTCTCATTAA AAGAATACAT 
    TGATATGTTG CTTGAAATGG TTTTTGGATC TTGATCACGT ATTTTGTAAC 
    AC

AT2G13610.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT1G53270.1); Has 407800 Blast hits to 367819 proteins in 4141 species: Archae - 7220; Bacteria - 321377; Metazoa - 9869; Fungi - 7399; Plants - 5931; Viruses - 18; Other Eukaryotes - 55986 (source: NCBI BLink).
Link
InterPro Scan - TAIR