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GT17974

CSHL Arabidopsis genetrap mutant lines

Original: GT17974

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17974

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 71024 [Map]; Strand: w
      • AT1G01150.1 - [+] show detail - Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT17974 - 5-prime edge 
    ATTTCTCCAC TCCCTCCTAT CCAAAATAAA CATATACTAT AAGTTTAAGC 
    TAAAAGTGTA TTTCAAGAAA AAAGAGTGGT GGTTTTACCC TCAACATCTT 
    CTCTTCGTTG ACTGTCCATA GCACCCTTTT TGGCTGATCA TTAACAACAG 
    CATAAGCTTC TCCGCAAGAT TTCTCCATAT CAATGAATTG ATCTGTTGAC 
    TCGTCTAACT GGGAATTTCG AGCCTTAAGG TGCTTGACCA GTTCTTGTAA 
    TTGATGAAGG TTCTCATGTA GTTGCATTGG TAGTGAATTA TCAGAACCAT 
    TCTCTAGTTG ACTGTTTTCT CTCGTCATGA CTATATCTCC ACTCTTCATC 
    TTCACTCGAC A

AT1G01150.1

Model type
Protein coding
Short Description
Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Computational Description
Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: TRF-like 10 (TAIR:AT5G03780.1); Has 94 Blast hits to 77 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR