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GT17994

CSHL Arabidopsis genetrap mutant lines

Original: GT17994

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17994

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23066877 [Map]; Strand: w
      • AT5G57000.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -1527; Region: intergenic
      • AT5G57010.1 - [+] show detail - calmodulin-binding family protein
        Distance: -1160; Region: intergenic
    Flanking Genome Sequence: GT17994 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATTGACA GCGGAGTCAA 
    CCAATTGTGG TCAAGTCTTT TTACTTTTGG GTTTTCTCAA AAGAGTTTCT 
    TCTTCTTGTT TTCTACTAAA TTGTGCAGCG TACGTGTTAG TTCAAAGCTG 
    TTGGTCTATT TGTCTCACTT GTTCTCCTTT TACACGACAC AAAATGACAC 
    GTTTGTGTTA ATATATTACT ACCAAGATTA CACTTATACA AAATCAACAT 
    TTTTTGTTAA CTAGTTGTCA TATGATCGTT AAAGTTTATC TTTAACCCAA 
    AATATATAAT CGGAATGCTA ATACCGCAGT CGTCACAAAT GGACTAAAAA 
    CGTTTCACAA ATTTGTACAT ATTAATACTA ATCAATACTA TTAAAACTAA 
    AAAGAATATG TTAGTTTGAA CGTTTTTGAT TCGAGAATAA TTAATTAGTG 
    ATTGTTATAT TCAAGAAAAA CAATCAAATA ATTTTTTAAT TACCAATATA 
    TTTTGAATAG CTAAAATAAC AATACTGTAT GTACGTTATA GTTAGAGAAC 
    TACACATATA CAATTTGATT TCTTCGTGGG CATTGAA

AT5G57000.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57010.1

Model type
Protein coding
Short Description
calmodulin-binding family protein
Computational Description
calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT4G33050.3); Has 390 Blast hits to 271 proteins in 57 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 100; Plants - 264; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR