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GT18002

CSHL Arabidopsis genetrap mutant lines

Original: GT18002

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18002

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22225237 [Map]; Strand: c
      • AT3G60160.1 - [+] show detail - multidrug resistance-associated protein 9
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT18002 - 3-prime edge
    ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGTCAC AAGTAACACC 
    AAGGAAAAAG CAAAGACGAA ATGAGACAGC AAATTCAACC TGAAGGAAAG
    CCACTCCATT GCTGATGCAA CATGGAACCA TGGCCTTGAA TGGCTATCTA
    TTAGAACAAG GTTTGAGCTA ATGAAGCGAT CTCGTTGATC AAAAGCACGT
    ATTGTTGTTG CACCAGCAAG CGATTCAGCG AAATGGTGGA GAATTGGAGC
    TCTTTCTACT CCTGACATGC GTGACAGTTC TCTTGCTGTT GGTGTGTAAT
    ATCTCTAAAG ACAACACGAG TAAACAAAAA AGTAAGCAAG ATTTGTTGTA
    TCATTGTCAA GAAATTGGAT TTGTTTTCTC TCTTGCCTGG TAAAACACGC
    AGGCTACTGC TACTGGAATG AAGATGACAC AAACTTGCCA AGCAACTTGC
    GACATGACGA AGATGGTTCC AAACAATCTT GAATGATCGA AAAAGCACAC
    CCAACCTAAG TTTGACTGCC CATTTCCAAA ATCC

AT3G60160.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 9
Curator Summary
member of MRP subfamily
Computational Description
multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink).
Link
InterPro Scan - TAIR