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Mutant Lines
GT18006

GT18006

CSHL Arabidopsis genetrap mutant lines

Original: GT18006

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18006

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 364505 [Map]; Strand: w
- AT4G00870.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -814; Region: promoter
- AT4G00872.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
  Distance: 0; Region: intron1 (CDS)

AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTATTT 
TCACTTACAA ATTATAACCA ATATACAGAA ATATCCTCTA ATATATCAAT 
TTTTTCATTT GTGTCGAAAC ATAACGAATT TATCGTCAAA GAAAGATAAA 
GGTGAAGTGA AAACAGCTCT GGAGATTTGC AAAAAAGACT TGTCGACGAA 
TGCATCTACA ATACTGTCGG AAGCCAAAAC AAGTTTGAAA ACCGGTGATT 
ATGATAAAAC CAACAAATCG ACAAAGCTTG CGCTTGGCTT TCCTTTGAGA 
TGTATGTTCA ATCTCAAACG TGTCAAGTTC ACGTCTCCCC AACTATTTGG 
TCAAATCAAT ATCTATGCCC AACTCTCTAA CGCTGCTATG AGGATCATTG 
ATCGCTTCTA ATAAGTAATA ACTCCTTATT GTTTTATATG TAACTCAACT 
TCGATCAATG CTTACCTGCA ATTTGAATAA ATCATTTCCT TTATGAAATT 
TATAAAGTCA CGTATATCCA TTTGTTGTAG CTCTCATGTT TTTTTTT

AT4G00870.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G16430.1); Has 3066 Blast hits to 2737 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 39; Plants - 2956; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00872.1

Model type: Protein coding
Short Description: Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description: Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G56100.2); Has 34 Blast hits to 34 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR