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GT18022

CSHL Arabidopsis genetrap mutant lines

Original: GT18022

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18022

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 347699 [Map]; Strand: w
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18022 - 5-prime edge 
    CATCACCACC TTTCTTCAAC CTCGCCGCAA CTTTCCGCGA CAACATCAGA 
    TCGTTCCTCC GTGAATATGC CGAGATTGAA GATTACACCA TCGACGGAGC 
    CACCGTCTCT ACTATTTTCC TTGGAAGCCA AGCAAATGGC GTCGTTTTCC 
    CTCTTTACAT CATCGAACAA CAAATCTCTG ATTCTTCTCC AAACCCTCTC 
    TGCGATTTCT GTCGATGCTT TGGTAAATAA TAAATCTTAG GTTTTGTTTT 
    TTCGTTGTTC TTGGTAAAGT TTCGATTTTG GATCGTTTAC GTGTGTGTAT 
    ATATATAGGT TGGGGTCATC ACTATGTAAC GAAGAGGAAG TATCATATGA 
    TAATCCCAAA CCGTGATGAA TGGAATGAGC CATTGAAGAG AGAAAGCTTG 
    AAGCTTTCTT CACATTTGAT GCATGGTTTG ATTCATTGCA ATGGTTTTGG 
    TCATTTGCTT TGTATCAACA CTGATCTTGA TGATCCTAAT CACCTCTCTG 
    GGGACCAAAT CATGGACTT

AT2G01810.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 637 Blast hits to 622 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 216; Plants - 250; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR