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GT18042

CSHL Arabidopsis genetrap mutant lines

Original: GT18042

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18042

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30242709 [Map]; Strand: w
      • AT1G80440.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18042 - 5-prime edge 
    CCTGGATGTG TACAATGTTA CTTACGTAGC GGTGAGGCCT GGGAAGCTGA 
    TTGTGATCGG CAACGGGAAG GCGTTGGCTG GATACGGTGA AGCCACCGTA 
    GGGTATATAT GTGATTTAAG TAGCTCACGA TGGGTAAAAT TGGAAACACA 
    CGGTGGTCAT GTTCAAGCTG GCTGCTTCTT GGAGGTCTAA TGGAAAACCT 
    ATTCATCTCA CTCGACTAAA CCTAAACCGC AACAAACCAA TGGGTAGTCT 
    CGTGTGTCAA TCTACAAATC TTTTCATGAA CAACCAAATA AAGAAATATG 
    GTATTTATTC AGTGTCACTT TACCAAATAT TTATGTTCTC TATACAAAAC 
    TTCAAAAGGA AGATTTGAAC TTTTAGGTTC TCTATACAAA ACTGATCTAA 
    TTATATAATT GCAAGCAAAC AAACTTTCGA AACATGTGTC GACACAAAAC 
    TTTTAAAGTT TATTAAAGGA GCCTTGATTT TGGTATCCAA GAACTTTAAT 
    GGGTTTCATA GACTAATCCT ATTAATTTTT

AT1G80440.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G15670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR