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GT18074

CSHL Arabidopsis genetrap mutant lines

Original: GT18074

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18074

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1240946 [Map]; Strand: w
      • AT4G02780.1 - [+] show detail - Terpenoid cyclases/Protein prenyltransferases superfamily protein
        Distance: 0; Region: intron10 (CDS)
    Flanking Genome Sequence: GT18074 - 5-prime edge 
    CCTACTTTCT CCCTGATCAA AATACCCTTA TTTCCCAAAT ATACATTAAT 
    TGTCAGTGTA TGCATTTTAA CATTACAAAG CAAAAGTGCA GTGCATTTTT 
    TTATTGCAAT GCATTTGTTT TGGATTCATG TGGTCTATTT ATATGCAAAA 
    TAATTAAATT TTTCAAAAAA AAAAAGAAAA ATATTTTGTC CCTTTAAAGG 
    GTTTTGCCAA TCCAAACGTC TTTTTCCCCC CCATTTGGAT AAAAAAAAAA 
    TCCCGTCTCT CCTCAAGGAA AGTTGGCGTC CCTGGGAATC TTTAAGGCAA 
    CCCCATTTTT TCTTGCAAAA AATTTTTTCA AAGATATTTG GAAAACCCTT 
    AAAAAAAAAG GTAAAAATTA GAAATTTACC CCAATTGCCC AAAAAAGGCC 
    AACCGGGTTT GGGGGT

AT4G02780.1

Model type
Protein coding
Short Description
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Curator Summary
Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis
Computational Description
GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR