Home
Mutant Lines
GT18097

GT18097

CSHL Arabidopsis genetrap mutant lines

Original: GT18097

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18097

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 168238 [Map]; Strand: w
  - AT2G01350.1 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -979; Region: promoter
  - AT2G01350.2 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -991; Region: promoter
  - AT2G01350.3 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -985; Region: promoter
  - AT2G01350.4 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -991; Region: promoter
  - AT2G01360.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT18097 - 3-prime edge
```
TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATAAACA TCCATCAGCG 
CAGTGTAAGC AGATAGACCC TTTTGATCAT CCGGAAGTAA GTCTAAAGCC 
TCTGCAGCTA AGCTAGGTCT TCTCCCAAAC CCGAGCATGT GGATCAGCAT 
TGCTCCATGG TACACACCAA GCGAGTGTTG GGATTTCACC ATCTCCTTGA 
CCACATCAAT CACTTTAGAG AGCTCGTTTG ATCTCAGAAA GTTACCAGCT 
AACGCAAGAT ACGCTGACTT CTCAAGATGA ATTCCCATTT CCAAGCTGTA 
ATCAAGAGCC AACGAAGCCA AGTAAATAAC CAAGATACTG TGCCAACTAT 
TAGTAGTCAT TAAGAGACAA AATCAGTACT AGATACTGTG CCAACTATTG 
TCAAACCCAA AAGTGTTTGG ACGGGTTCCT ATTATATCTC TATGCTTTTA 
CTA
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 168305 [Map]; Strand: w
- AT2G01360.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
  Distance: 0; Region: exon1 (CDS)

CCTACTTTCT CCCTGGATGT TTATATCTCA GCAGGGAGTC CAGAGAAAGC 
AATGAAGATA TTAGGAGAGA TGAGAGAGCG AGAGATAATG CCTTCGCTTG 
GGACATACGA TGTTCTATTG TCTGGTCTTG AGAAAACCAG TGATTTCCAG 
AGAGAAACAT CGTCATTGAG GAAGGAGCAG AAGAGTCTTG TTGCTTCTAC 
ACGTTTCCGG GAAATTGTTC ATGTTGAAGA CAAAATATGC ATGTGATCTT 
CTGTTTGCTT GCAAGATAGA CAAAATCTGT TGCTTCTGTT TGATTACAAA 
ATATGTGATC TCAGAAACAT TGATGCTTGT TGACCCTAAG CAAAGTGAGA 
GGTATCTAAC AAGAGTATTC TGACCAAAAT TTAGACCATA AACCTTGACC 
ACAATTGGAT GCATTAAAAT TTAATCTGCC GTTCTTCCAT AGTGTTTTTA 
ACAACACAAT CCAAGTATCA AAAACCAATA ACAAACCAAA TAGAAAAAAC 
AGAGTCATAT GGGATGGAAA TGAAAAAGAT GCATTAAACC TCTAAATCGA 
TAATTGTCTA ATTTGTTGCT TCAATGATCA TAGTGTTGAC CTTTTGCAAA 
AAACTTGTCT TTAGCCGTAG GTTTTCAGAT TCTTCATCTT TCACAGCTTG 
ACTTCTCTC

AT2G01350.1

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5853 Blast hits to 5853 proteins in 1914 species: Archae - 184; Bacteria - 3582; Metazoa - 59; Fungi - 129; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.2

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.3

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5825 Blast hits to 5825 proteins in 1916 species: Archae - 184; Bacteria - 3588; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.4

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01360.1

Model type: Protein coding
Short Description: pentatricopeptide (PPR) repeat-containing protein
Computational Description: pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G01390.1); Has 425 Blast hits to 414 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR