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GT18102

CSHL Arabidopsis genetrap mutant lines

Original: GT18102

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18102

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 747367 [Map]; Strand: c
      • AT2G02680.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18102 - 5-prime edge 
    TCCTACTTTA TCCCTGGCCA CTATGCCTCC TCTCCATGAC ATAATGTGAG 
    GTAATGATCA TCATGCTTAT ATCTTATCAC ATATGGTAAG GTAGCGCATT 
    CAAAACATAT AATAAAGTCA CCCTCAATGC AGTTGAGTAC CTGGTTATCT 
    TTCGTTGACT TGCAAATGTG GCACATTGGC TTTACGTTTG GGCGTAACGC 
    TAGGAATAAT GGGTGTTGAT GGCCTTGATA GTTGAACGGC TCAGAAGCCG 
    ATGCACATAC TACATCTAGT ATGTAATCAC AATCCTCGAA CGTACACTCA 
    TATCCGAAAC CATTACATAA GCGATCACAT GCATCACATA AGAATAAATC 
    ATTTTCATGG ACAACCTTTT GTTGAAGTGC ATGGGGATGT AATGGATGAA 
    ACTTCTTTTG CGGAGCTTCT GCACATGTTT CGTGTAGAAT GAAGTCACAT 
    TCCACACATA TATAAAAGTT TTCCTCGTTG ATTGGAAGAG CACATGCCTG 
    ACAAAACTTG TTTCCGCCGA CGTGAACTCC ACTGGTCTCC AATTCCATTT 
    GACAGCCATG AGAAAAATGG AGTATTATTC CATCTGATAT CCTTTTGAAC 
    GGCGGCTCAA CTT

AT2G02680.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, RanBP2-type (InterPro:IPR001876), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G02690.1); Has 1749 Blast hits to 685 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 10; Plants - 1682; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR