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GT18119

CSHL Arabidopsis genetrap mutant lines

Original: GT18119

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT18119

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18912010 [Map]; Strand: c
      • AT3G50870.1 - [+] show detail - GATA type zinc finger transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT18119 - 5-prime edge 
    TCCGACGACG GTGTTTCCTG AAGCCGCAGT AGTTCTTCTC TCTTCCTTCT 
    TGAAACGAAT GCCGCATGCG TTGCATAGGG ACTGCAAATT CCAAAACCAT 
    CCATATCATC ATTAGCCATC AATATATCTT ATATTTAATG TTCGTTCAAT 
    ACATAAATCT CTATATAGTG ATGAAAATAT TCGAAAAGAA AATAAATTAA 
    TGTCTTTTAT TGAAATATCT GTTTTAAAAC CTATATTCAA CTAAATTTAC 
    TGAACCATCA CAATCATTAT TTAATGTTTC TTTCAATAAA TTAAACTATA 
    C

AT3G50870.1

Model type
Protein coding
Short Description
GATA type zinc finger transcription factor family protein
Curator Summary
Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.
Computational Description
MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
Link
InterPro Scan - TAIR