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GT18131

CSHL Arabidopsis genetrap mutant lines

Original: GT18131

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18131

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 111038 [Map]; Strand: w
      • AT4G00240.1 - [+] show detail - phospholipase D beta 2
        Distance: -320; Region: promoter
    Flanking Genome Sequence: GT18131 - 3-prime edge 
    GTAGAAGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAACCGGGA 
    ATAGTAAGTT AAGTTGACCA AAACCAAAAC CAATAAAATC AAAATCGAGA 
    GACTCTTTCT TCCCCCAAGC GAAGAAGCGA TGATCAAAAT TTTACAACGG 
    TTCCTCCATT TTCAGCGAAG GTAAGTCTCA CCTAATTCCT TGGAACTAAG 
    CTCCGCTGTG ATCCGAATGT ACTTATATAT CTCTCTCTTC TGATCAATTC 
    GCAAACCGCC ATTGTTGCTT TTTTGAAATT TCGCTTCTGA TGAAGAAATG 
    TTGATCGGAG AAAACGTTGA AGACGTTTGA ATTTCTTTAT GAATTAGTCA 
    GTTGTGGTGT TAGTTAGTTA CGATGGAGAA TTATGGTTGG AATTACCCTT 
    ATTACCCTTA CAGGCCTCCG CGGCCTAATC CTCCTTACCC AGCACCGCCT 
    CATGGCCCTC ATCACCATGG ATCAATGTCT CATTCGGGTC CATTAGACCA 
    CCACCACCCT CCAATGAGTT ACTATGCTTC TTTTGATTAC CAACACCAAC 
    CTCCTCCTCC TTACCCTCCA GTGAGTTACT ATGCTTCGTT TTCAAGTCAT 
    TCAGATTTAT CATACTCAGG CAGGCTAGAT TCGTCTGGGC ATGGTTTTAC 
    ATCTACCGCA TCGCCGC

AT4G00240.1

Model type
Protein coding
Short Description
phospholipase D beta 2
Curator Summary
member of C2-PLD subfamily
Computational Description
phospholipase D beta 2 (PLDBETA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D, plant (InterPro:IPR011402), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D/Transphosphatidylase (InterPro:IPR001736); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2407 Blast hits to 1935 proteins in 427 species: Archae - 0; Bacteria - 522; Metazoa - 526; Fungi - 534; Plants - 642; Viruses - 3; Other Eukaryotes - 180 (source: NCBI BLink).
Link
InterPro Scan - TAIR